Analysis of interatomic Contacts of Structural Units in PDB entry:
6XSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XSX entry

There is 1 chain in PDB entry 6XSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 709LYS 1220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6XSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
723 731Right-handed alpha
Helix 2
AA2
A
797 801Right-handed 310
Helix 3
AA3
A
818 823Right-handed alpha
Helix 4
AA4
A
845 863Right-handed alpha
Helix 5
AA5
A
882 894Right-handed alpha
Helix 6
AA6
A
896 916Right-handed alpha
Helix 7
AA7
A
921 925Right-handed 310
Helix 8
AA8
A
954 956Right-handed 310
Helix 9
AA9
A
957 964Right-handed alpha
Helix 10
AB1
A
967 978Right-handed alpha
Helix 11
AB2
A
985 990Right-handed alpha
Helix 12
AB3
A
991 1001Right-handed alpha
Helix 13
AB4
A
1005 1010Right-handed alpha
Helix 14
AB5
A
1011 1016Right-handed alpha
Helix 15
AB6
A
1016 1023Right-handed alpha
Helix 16
AB7
A
1037 1053Right-handed alpha
Helix 17
AB8
A
1055 1067Right-handed alpha
Helix 18
AB9
A
1073 1090Right-handed alpha
Helix 19
AC1
A
1093 1100Right-handed alpha
Helix 20
AC2
A
1105 1113Right-handed alpha
Helix 21
AC3
A
1121 1126Right-handed 310
Helix 22
AC4
A
1127 1132Right-handed alpha
Helix 23
AC5
A
1163 1166Right-handed 310
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There are 5 sheets in PDB entry 6XSX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
715 717first strand
Strand 2
A
827 831anti-parallel
Strand 3
A
751 757anti-parallel
Strand 4
A
787 792anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
779 782first strand
Strand 2
A
766 771anti-parallel
Strand 3
A
808 814anti-parallel
Strand 4
A
740 747anti-parallel
Strand 5
A
834 835anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
838 840first strand
Strand 2
A
870 873parallel
Strand 3
A
877 881anti-parallel
Strand 4
A
931 935parallel
Strand 5
A
950 953parallel
Strand 6
A
945 947anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1143 1150first strand
Strand 2
A
1154 1161anti-parallel
Strand 3
A
1188 1191anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1179 1184first strand
Strand 2
A
1169 1176anti-parallel
Strand 3
A
1202 1208anti-parallel
Strand 4
A
1217 1219anti-parallel
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