Analysis of interatomic Contacts of Structural Units in PDB entry:
6XU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XU0 entry

There are 6 chains in PDB entry 6XU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10LEU 427
R
 A 1 G 7
S
 C 9 T 14
B
 GLY 10LEU 427
P
 A 1 G 7
Q
 C 8 T 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 6XU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 18Right-handed 310
Helix 2
AA2
A
25 37Right-handed alpha
Helix 3
AA3
A
58 75Right-handed alpha
Helix 4
AA4
A
92 107Right-handed alpha
Helix 5
AA5
A
119 132Right-handed alpha
Helix 6
AA6
A
142 144Right-handed 310
Helix 7
AA7
A
148 164Right-handed alpha
Helix 8
AA8
A
221 241Right-handed alpha
Helix 9
AA9
A
260 278Right-handed alpha
Helix 10
AB1
A
359 375Right-handed alpha
Helix 11
AB2
A
388 407Right-handed alpha
Helix 12
AB3
A
417 423Right-handed alpha
Helix 13
AB4
B
16 18Right-handed 310
Helix 14
AB5
B
25 37Right-handed alpha
Helix 15
AB6
B
58 75Right-handed alpha
Helix 16
AB7
B
92 107Right-handed alpha
Helix 17
AB8
B
119 132Right-handed alpha
Helix 18
AB9
B
141 145Right-handed alpha
Helix 19
AC1
B
148 164Right-handed alpha
Helix 20
AC2
B
221 241Right-handed alpha
Helix 21
AC3
B
260 278Right-handed alpha
Helix 22
AC4
B
359 375Right-handed alpha
Helix 23
AC5
B
388 408Right-handed alpha
Helix 24
AC6
B
413 416Right-handed 310
Helix 25
AC7
B
417 423Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 6XU0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
20 22anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 87first strand
Strand 2
A
48 53parallel
Strand 3
A
110 115parallel
Strand 4
A
136 140parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 213first strand
Strand 2
A
195 202anti-parallel
Strand 3
A
181 189anti-parallel
Strand 4
A
248 254parallel
Strand 5
A
286 294parallel
Strand 6
A
343 353anti-parallel
Strand 7
A
322 328anti-parallel
Strand 8
A
314 317anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 300first strand
Strand 2
A
341 343anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 14first strand
Strand 2
B
20 22anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 87first strand
Strand 2
B
48 53parallel
Strand 3
B
110 115parallel
Strand 4
B
136 140parallel
Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 213first strand
Strand 2
B
195 202anti-parallel
Strand 3
B
181 189anti-parallel
Strand 4
B
248 254parallel
Strand 5
B
286 294parallel
Strand 6
B
346 353anti-parallel
Strand 7
B
322 325anti-parallel
Strand 8
B
315 319anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 300first strand
Strand 2
B
341 343anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il