Analysis of interatomic Contacts of Structural Units in PDB entry:
6XU4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XU4 entry

There are 5 chains in PDB entry 6XU4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 1LEU 183
A
 VAL 187MET 412
B
 ARG 1LEU 183
B
 VAL 187MET 412
E
 PHE 283MET 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6XU4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 20Right-handed alpha
Helix 2
AA2
A
123 127Right-handed 310
Helix 3
AA3
A
175 180Right-handed 310
Helix 4
AA4
A
187 191Right-handed 310
Helix 5
AA5
A
194 200Right-handed 310
Helix 6
AA6
A
201 206Right-handed alpha
Helix 7
AA7
A
272 287Right-handed alpha
Helix 8
AA8
A
295 306Right-handed alpha
Helix 9
AA9
A
311 323Right-handed alpha
Helix 10
AB1
A
332 340Right-handed alpha
Helix 11
AB2
A
349 360Right-handed alpha
Helix 12
AB3
A
369 380Right-handed alpha
Helix 13
AB4
A
384 396Right-handed alpha
Helix 14
AB5
A
405 411Right-handed alpha
Helix 15
AB6
B
4 20Right-handed alpha
Helix 16
AB7
B
123 127Right-handed 310
Helix 17
AB8
B
156 158Right-handed 310
Helix 18
AB9
B
175 180Right-handed 310
Helix 19
AC1
B
187 191Right-handed 310
Helix 20
AC2
B
194 200Right-handed 310
Helix 21
AC3
B
201 206Right-handed alpha
Helix 22
AC4
B
272 287Right-handed alpha
Helix 23
AC5
B
295 306Right-handed alpha
Helix 24
AC6
B
311 323Right-handed alpha
Helix 25
AC7
B
332 340Right-handed alpha
Helix 26
AC8
B
355 360Right-handed alpha
Helix 27
AC9
B
368 380Right-handed alpha
Helix 28
AD1
B
384 396Right-handed alpha
Helix 29
AD2
B
405 411Right-handed alpha
Helix 30
AD3
E
295 306Right-handed alpha
Helix 31
AD4
E
311 323Right-handed alpha
Helix 32
AD5
E
332 338Right-handed alpha
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There are 7 sheets in PDB entry 6XU4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 29first strand
Strand 2
A
34 44anti-parallel
Strand 3
A
50 61anti-parallel
Strand 4
A
211 219anti-parallel
Strand 5
A
224 234anti-parallel
Strand 6
A
237 247anti-parallel
Strand 7
A
130 141parallel
Strand 8
A
144 155anti-parallel
Strand 9
A
160 167anti-parallel
Strand 10
A
91 100anti-parallel
Strand 11
A
73 82anti-parallel
Strand 12
A
24 29anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
330 331anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 368first strand
Strand 2
A
402 404anti-parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 29first strand
Strand 2
B
34 44anti-parallel
Strand 3
B
50 61anti-parallel
Strand 4
B
211 219anti-parallel
Strand 5
B
224 234anti-parallel
Strand 6
B
237 247anti-parallel
Strand 7
B
131 141parallel
Strand 8
B
144 155anti-parallel
Strand 9
B
160 166anti-parallel
Strand 10
B
91 99anti-parallel
Strand 11
B
73 81anti-parallel
Strand 12
B
24 29anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 294first strand
Strand 2
B
330 331anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
366 367first strand
Strand 2
B
403 404anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
293 294first strand
Strand 2
E
330 331anti-parallel
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