Analysis of interatomic Contacts of Structural Units in PDB entry:
6XUI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XUI entry

There are 4 chains in PDB entry 6XUI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	VAL 556
B	ALA 1	VAL 556
C	ALA 1	VAL 556
D	ALA 1	VAL 556

There are153 helices in PDB entry 6XUI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	6	Right-handed alpha
Helix 2	AA2	A	6	20	Right-handed alpha
Helix 3	AA3	A	21	23	Right-handed 310
Helix 4	AA4	A	24	32	Right-handed alpha
Helix 5	AA5	A	34	39	Right-handed alpha
Helix 6	AA6	A	60	74	Right-handed alpha
Helix 7	AA7	A	75	85	Right-handed alpha
Helix 8	AA8	A	98	103	Right-handed alpha
Helix 9	AA9	A	117	138	Right-handed alpha
Helix 10	AB1	A	156	159	Right-handed 310
Helix 11	AB2	A	160	170	Right-handed alpha
Helix 12	AB3	A	171	174	Right-handed 310
Helix 13	AB4	A	187	196	Right-handed alpha
Helix 14	AB5	A	197	198	Right-handed 310
Helix 15	AB6	A	199	201	Right-handed 310
Helix 16	AB7	A	214	233	Right-handed alpha
Helix 17	AB8	A	234	240	Right-handed 310
Helix 18	AB9	A	248	256	Right-handed alpha
Helix 19	AC1	A	258	260	Right-handed 310
Helix 20	AC2	A	270	274	Right-handed 310
Helix 21	AC3	A	277	279	Right-handed 310
Helix 22	AC4	A	280	288	Right-handed alpha
Helix 23	AC5	A	288	309	Right-handed alpha
Helix 24	AC6	A	310	313	Right-handed 310
Helix 25	AC7	A	314	329	Right-handed alpha
Helix 26	AC8	A	341	345	Right-handed 310
Helix 27	AC9	A	346	360	Right-handed alpha
Helix 28	AD1	A	384	389	Right-handed 310
Helix 29	AD2	A	390	397	Right-handed alpha
Helix 30	AD3	A	414	417	Right-handed 310
Helix 31	AD4	A	418	438	Right-handed alpha
Helix 32	AD5	A	440	452	Right-handed alpha
Helix 33	AD6	A	454	462	Right-handed alpha
Helix 34	AD7	A	463	466	Right-handed 310
Helix 35	AD8	A	482	505	Right-handed alpha
Helix 36	AD9	A	511	521	Right-handed alpha
Helix 37	AE1	A	524	529	Right-handed alpha
Helix 38	AE2	A	538	552	Right-handed alpha
Helix 39	AE3	B	2	6	Right-handed alpha
Helix 40	AE4	B	6	20	Right-handed alpha
Helix 41	AE5	B	21	23	Right-handed 310
Helix 42	AE6	B	24	32	Right-handed alpha
Helix 43	AE7	B	34	39	Right-handed alpha
Helix 44	AE8	B	60	74	Right-handed alpha
Helix 45	AE9	B	75	85	Right-handed alpha
Helix 46	AF1	B	98	103	Right-handed alpha
Helix 47	AF2	B	117	137	Right-handed alpha
Helix 48	AF3	B	156	159	Right-handed 310
Helix 49	AF4	B	160	170	Right-handed alpha
Helix 50	AF5	B	171	174	Right-handed 310
Helix 51	AF6	B	187	196	Right-handed alpha
Helix 52	AF7	B	197	198	Right-handed 310
Helix 53	AF8	B	199	201	Right-handed 310
Helix 54	AF9	B	214	233	Right-handed alpha
Helix 55	AG1	B	234	240	Right-handed 310
Helix 56	AG2	B	248	256	Right-handed alpha
Helix 57	AG3	B	258	260	Right-handed 310
Helix 58	AG4	B	270	274	Right-handed 310
Helix 59	AG5	B	277	279	Right-handed 310
Helix 60	AG6	B	280	288	Right-handed alpha
Helix 61	AG7	B	288	309	Right-handed alpha
Helix 62	AG8	B	310	313	Right-handed 310
Helix 63	AG9	B	314	329	Right-handed alpha
Helix 64	AH1	B	341	345	Right-handed 310
Helix 65	AH2	B	346	360	Right-handed alpha
Helix 66	AH3	B	384	389	Right-handed 310
Helix 67	AH4	B	390	397	Right-handed alpha
Helix 68	AH5	B	415	417	Right-handed 310
Helix 69	AH6	B	418	438	Right-handed alpha
Helix 70	AH7	B	440	452	Right-handed alpha
Helix 71	AH8	B	454	462	Right-handed alpha
Helix 72	AH9	B	463	466	Right-handed 310
Helix 73	AI1	B	482	505	Right-handed alpha
Helix 74	AI2	B	511	521	Right-handed alpha
Helix 75	AI3	B	522	529	Right-handed 310
Helix 76	AI4	B	538	552	Right-handed alpha
Helix 77	AI5	C	2	6	Right-handed alpha
Helix 78	AI6	C	6	20	Right-handed alpha
Helix 79	AI7	C	21	23	Right-handed 310
Helix 80	AI8	C	24	32	Right-handed alpha
Helix 81	AI9	C	34	39	Right-handed alpha
Helix 82	AJ1	C	60	74	Right-handed alpha
Helix 83	AJ2	C	75	85	Right-handed alpha
Helix 84	AJ3	C	98	103	Right-handed alpha
Helix 85	AJ4	C	117	137	Right-handed alpha
Helix 86	AJ5	C	156	159	Right-handed 310
Helix 87	AJ6	C	160	170	Right-handed alpha
Helix 88	AJ7	C	171	174	Right-handed 310
Helix 89	AJ8	C	188	196	Right-handed alpha
Helix 90	AJ9	C	197	198	Right-handed 310
Helix 91	AK1	C	199	201	Right-handed 310
Helix 92	AK2	C	214	233	Right-handed alpha
Helix 93	AK3	C	234	240	Right-handed 310
Helix 94	AK4	C	248	256	Right-handed alpha
Helix 95	AK5	C	258	260	Right-handed 310
Helix 96	AK6	C	270	274	Right-handed 310
Helix 97	AK7	C	277	279	Right-handed 310
Helix 98	AK8	C	280	288	Right-handed alpha
Helix 99	AK9	C	288	309	Right-handed alpha
Helix 100	AL1	C	310	313	Right-handed 310
Helix 101	AL2	C	314	329	Right-handed alpha
Helix 102	AL3	C	341	345	Right-handed 310
Helix 103	AL4	C	346	360	Right-handed alpha
Helix 104	AL5	C	384	389	Right-handed 310
Helix 105	AL6	C	390	397	Right-handed alpha
Helix 106	AL7	C	415	417	Right-handed 310
Helix 107	AL8	C	418	438	Right-handed alpha
Helix 108	AL9	C	440	452	Right-handed alpha
Helix 109	AM1	C	454	462	Right-handed alpha
Helix 110	AM2	C	463	466	Right-handed 310
Helix 111	AM3	C	482	505	Right-handed alpha
Helix 112	AM4	C	511	521	Right-handed alpha
Helix 113	AM5	C	524	529	Right-handed alpha
Helix 114	AM6	C	538	552	Right-handed alpha
Helix 115	AM7	D	2	6	Right-handed alpha
Helix 116	AM8	D	6	20	Right-handed alpha
Helix 117	AM9	D	21	23	Right-handed 310
Helix 118	AN1	D	24	32	Right-handed alpha
Helix 119	AN2	D	34	39	Right-handed alpha
Helix 120	AN3	D	60	74	Right-handed alpha
Helix 121	AN4	D	75	85	Right-handed alpha
Helix 122	AN5	D	98	103	Right-handed alpha
Helix 123	AN6	D	117	137	Right-handed alpha
Helix 124	AN7	D	156	159	Right-handed 310
Helix 125	AN8	D	160	170	Right-handed alpha
Helix 126	AN9	D	171	174	Right-handed 310
Helix 127	AO1	D	187	196	Right-handed alpha
Helix 128	AO2	D	197	198	Right-handed 310
Helix 129	AO3	D	199	201	Right-handed 310
Helix 130	AO4	D	214	233	Right-handed alpha
Helix 131	AO5	D	234	236	Right-handed 310
Helix 132	AO6	D	237	241	Right-handed alpha
Helix 133	AO7	D	248	256	Right-handed alpha
Helix 134	AO8	D	258	260	Right-handed 310
Helix 135	AO9	D	270	274	Right-handed 310
Helix 136	AP1	D	277	279	Right-handed 310
Helix 137	AP2	D	280	288	Right-handed alpha
Helix 138	AP3	D	288	309	Right-handed alpha
Helix 139	AP4	D	310	313	Right-handed 310
Helix 140	AP5	D	314	329	Right-handed alpha
Helix 141	AP6	D	341	345	Right-handed 310
Helix 142	AP7	D	346	360	Right-handed alpha
Helix 143	AP8	D	384	389	Right-handed 310
Helix 144	AP9	D	390	397	Right-handed alpha
Helix 145	AQ1	D	414	417	Right-handed 310
Helix 146	AQ2	D	418	438	Right-handed alpha
Helix 147	AQ3	D	440	452	Right-handed alpha
Helix 148	AQ4	D	454	462	Right-handed alpha
Helix 149	AQ5	D	463	466	Right-handed 310
Helix 150	AQ6	D	482	505	Right-handed alpha
Helix 151	AQ7	D	511	521	Right-handed alpha
Helix 152	AQ8	D	522	529	Right-handed 310
Helix 153	AQ9	D	538	552	Right-handed alpha

There are 12 sheets in PDB entry 6XUI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	44	first strand
Strand 2	A	49	53	anti-parallel
Strand 3	A	473	480	anti-parallel
Strand 4	A	403	410	parallel
Strand 5	A	334	339	parallel
Strand 6	A	377	379	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	112	first strand
Strand 2	A	115	116	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	183	first strand
Strand 2	A	150	154	parallel
Strand 3	A	203	208	parallel
Strand 4	A	242	246	parallel
Strand 5	A	262	264	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	44	first strand
Strand 2	B	49	53	anti-parallel
Strand 3	B	473	480	anti-parallel
Strand 4	B	403	410	parallel
Strand 5	B	334	339	parallel
Strand 6	B	377	379	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	112	first strand
Strand 2	B	115	116	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	183	first strand
Strand 2	B	150	154	parallel
Strand 3	B	203	208	parallel
Strand 4	B	242	246	parallel
Strand 5	B	262	264	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	44	first strand
Strand 2	C	49	53	anti-parallel
Strand 3	C	473	480	anti-parallel
Strand 4	C	403	410	parallel
Strand 5	C	334	339	parallel
Strand 6	C	377	379	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	112	first strand
Strand 2	C	115	116	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	183	first strand
Strand 2	C	150	154	parallel
Strand 3	C	203	208	parallel
Strand 4	C	242	246	parallel
Strand 5	C	262	264	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	44	first strand
Strand 2	D	49	53	anti-parallel
Strand 3	D	473	480	anti-parallel
Strand 4	D	403	410	parallel
Strand 5	D	334	339	parallel
Strand 6	D	377	379	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	112	first strand
Strand 2	D	115	116	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	179	183	first strand
Strand 2	D	150	154	parallel
Strand 3	D	203	208	parallel
Strand 4	D	242	246	parallel
Strand 5	D	262	264	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XUI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XUI