Analysis of interatomic Contacts of Structural Units in PDB entry:
6XVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XVP entry

There is 1 chain in PDB entry 6XVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 54PHE 685
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6XVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 72Right-handed alpha
Helix 2
AA2
A
81 94Right-handed alpha
Helix 3
AA3
A
105 123Right-handed alpha
Helix 4
AA4
A
129 144Right-handed alpha
Helix 5
AA5
A
145 150Right-handed alpha
Helix 6
AA6
A
153 160Right-handed alpha
Helix 7
AA7
A
161 164Right-handed 310
Helix 8
AA8
A
166 170Right-handed 310
Helix 9
AA9
A
172 177Right-handed alpha
Helix 10
AB1
A
178 181Right-handed 310
Helix 11
AB2
A
182 195Right-handed alpha
Helix 12
AB3
A
227 233Right-handed 310
Helix 13
AB4
A
234 236Right-handed 310
Helix 14
AB5
A
237 259Right-handed alpha
Helix 15
AB6
A
264 286Right-handed alpha
Helix 16
AB7
A
289 293Right-handed 310
Helix 17
AB8
A
294 299Right-handed alpha
Helix 18
AB9
A
304 311Right-handed alpha
Helix 19
AC1
A
321 331Right-handed alpha
Helix 20
AC2
A
332 334Right-handed 310
Helix 21
AC3
A
347 359Right-handed alpha
Helix 22
AC4
A
362 379Right-handed alpha
Helix 23
AC5
A
380 382Right-handed 310
Helix 24
AC6
A
383 389Right-handed alpha
Helix 25
AC7
A
390 399Right-handed alpha
Helix 26
AC8
A
405 418Right-handed alpha
Helix 27
AC9
A
418 431Right-handed alpha
Helix 28
AD1
A
433 457Right-handed alpha
Helix 29
AD2
A
461 474Right-handed alpha
Helix 30
AD3
A
483 488Right-handed alpha
Helix 31
AD4
A
488 496Right-handed alpha
Helix 32
AD5
A
505 523Right-handed alpha
Helix 33
AD6
A
524 527Right-handed 310
Helix 34
AD7
A
557 559Right-handed 310
Helix 35
AD8
A
569 576Right-handed alpha
Helix 36
AD9
A
576 588Right-handed alpha
Helix 37
AE1
A
592 596Right-handed 310
Helix 38
AE2
A
607 627Right-handed alpha
Helix 39
AE3
A
630 634Right-handed 310
Helix 40
AE4
A
643 669Right-handed alpha
Helix 41
AE5
A
680 692Right-handed alpha
Helix 42
AE6
A
698 709Right-handed alpha
Helix 43
AE7
A
713 724Right-handed alpha
Helix 44
AE8
A
725 732Right-handed alpha
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There are 3 sheets in PDB entry 6XVP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 104first strand
Strand 2
A
695 697anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 207first strand
Strand 2
A
210 219anti-parallel
Strand 3
A
342 345parallel
Strand 4
A
300 303anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 480first strand
Strand 2
A
551 555parallel
Strand 3
A
544 546anti-parallel
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