Analysis of interatomic Contacts of Structural Units in PDB entry:
6XXQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XXQ entry

There are 2 chains in PDB entry 6XXQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7LYS 254
B
 ASN 7LYS 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6XXQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 24Right-handed alpha
Helix 2
AA2
A
34 37Right-handed 310
Helix 3
AA3
A
58 70Right-handed alpha
Helix 4
AA4
A
71 73Right-handed 310
Helix 5
AA5
A
93 96Right-handed 310
Helix 6
AA6
A
109 111Right-handed 310
Helix 7
AA7
A
112 117Right-handed alpha
Helix 8
AA8
A
128 140Right-handed alpha
Helix 9
AA9
A
149 154Right-handed alpha
Helix 10
AB1
A
158 175Right-handed alpha
Helix 11
AB2
A
180 198Right-handed alpha
Helix 12
AB3
A
202 212Right-handed alpha
Helix 13
AB4
A
215 230Right-handed alpha
Helix 14
AB5
A
241 254Right-handed alpha
Helix 15
AB6
B
8 24Right-handed alpha
Helix 16
AB7
B
34 37Right-handed 310
Helix 17
AB8
B
58 70Right-handed alpha
Helix 18
AB9
B
71 73Right-handed 310
Helix 19
AC1
B
93 96Right-handed 310
Helix 20
AC2
B
109 111Right-handed 310
Helix 21
AC3
B
112 117Right-handed alpha
Helix 22
AC4
B
128 140Right-handed alpha
Helix 23
AC5
B
149 153Right-handed 310
Helix 24
AC6
B
158 174Right-handed alpha
Helix 25
AC7
B
180 198Right-handed alpha
Helix 26
AC8
B
202 213Right-handed alpha
Helix 27
AC9
B
215 231Right-handed alpha
Helix 28
AD1
B
240 253Right-handed alpha
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There are 4 sheets in PDB entry 6XXQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 108first strand
Strand 2
A
84 91anti-parallel
Strand 3
A
46 53parallel
Strand 4
A
27 33anti-parallel
Strand 5
A
142 146anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
125 126anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 108first strand
Strand 2
B
84 91anti-parallel
Strand 3
B
46 53parallel
Strand 4
B
27 32anti-parallel
Strand 5
B
142 146anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 104first strand
Strand 2
B
125 126anti-parallel
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