Analysis of interatomic Contacts of Structural Units in PDB entry:
6XXY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XXY entry

There are 2 chains in PDB entry 6XXY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 358
B
 MET 1ILE 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6XXY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 34Right-handed alpha
Helix 2
AA2
A
44 53Right-handed alpha
Helix 3
AA3
A
57 66Right-handed alpha
Helix 4
AA4
A
77 81Right-handed 310
Helix 5
AA5
A
84 87Right-handed 310
Helix 6
AA6
A
88 93Right-handed alpha
Helix 7
AA7
A
93 101Right-handed alpha
Helix 8
AA8
A
123 129Right-handed alpha
Helix 9
AA9
A
141 145Right-handed 310
Helix 10
AB1
A
154 157Right-handed 310
Helix 11
AB2
A
168 184Right-handed alpha
Helix 12
AB3
A
198 213Right-handed alpha
Helix 13
AB4
A
225 235Right-handed alpha
Helix 14
AB5
A
236 239Right-handed 310
Helix 15
AB6
A
245 260Right-handed alpha
Helix 16
AB7
A
261 265Right-handed 310
Helix 17
AB8
A
297 313Right-handed alpha
Helix 18
AB9
A
314 331Right-handed alpha
Helix 19
AC1
A
346 357Right-handed alpha
Helix 20
AC2
B
14 34Right-handed alpha
Helix 21
AC3
B
46 50Right-handed 310
Helix 22
AC4
B
57 67Right-handed alpha
Helix 23
AC5
B
77 81Right-handed 310
Helix 24
AC6
B
84 87Right-handed 310
Helix 25
AC7
B
88 93Right-handed alpha
Helix 26
AC8
B
93 101Right-handed alpha
Helix 27
AC9
B
123 129Right-handed alpha
Helix 28
AD1
B
141 145Right-handed 310
Helix 29
AD2
B
154 157Right-handed 310
Helix 30
AD3
B
168 184Right-handed alpha
Helix 31
AD4
B
198 212Right-handed alpha
Helix 32
AD5
B
213 215Right-handed 310
Helix 33
AD6
B
225 235Right-handed alpha
Helix 34
AD7
B
236 239Right-handed 310
Helix 35
AD8
B
245 260Right-handed alpha
Helix 36
AD9
B
261 265Right-handed 310
Helix 37
AE1
B
286 290Right-handed 310
Helix 38
AE2
B
297 311Right-handed alpha
Helix 39
AE3
B
314 331Right-handed alpha
Helix 40
AE4
B
346 358Right-handed alpha
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There are 4 sheets in PDB entry 6XXY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
4 11parallel
Strand 3
A
69 74parallel
Strand 4
A
277 281parallel
Strand 5
A
267 271anti-parallel
Strand 6
A
105 111anti-parallel
Strand 7
A
132 138anti-parallel
Strand 8
A
241 244parallel
Strand 9
A
188 193parallel
Strand 10
A
219 224parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
159 167anti-parallel
Strand 3
B
159 167anti-parallel
Strand 4
B
150 152anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
35 37parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 42first strand
Strand 2
B
7 11parallel
Strand 3
B
70 74parallel
Strand 4
B
277 281parallel
Strand 5
B
267 271anti-parallel
Strand 6
B
105 111anti-parallel
Strand 7
B
132 138anti-parallel
Strand 8
B
241 244parallel
Strand 9
B
188 193parallel
Strand 10
B
219 224parallel
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