Analysis of interatomic Contacts of Structural Units in PDB entry:
6XYY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XYY entry

There is 1 chain in PDB entry 6XYY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3TRP 573
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6XYY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 43Right-handed 310
Helix 2
AA2
A
77 82Right-handed alpha
Helix 3
AA3
A
159 163Right-handed 310
Helix 4
AA4
A
164 172Right-handed alpha
Helix 5
AA5
A
183 188Right-handed alpha
Helix 6
AA6
A
190 194Right-handed 310
Helix 7
AA7
A
195 202Right-handed 310
Helix 8
AA8
A
205 222Right-handed alpha
Helix 9
AA9
A
223 225Right-handed 310
Helix 10
AB1
A
238 250Right-handed alpha
Helix 11
AB2
A
269 273Right-handed 310
Helix 12
AB3
A
275 290Right-handed alpha
Helix 13
AB4
A
293 298Right-handed 310
Helix 14
AB5
A
300 309Right-handed alpha
Helix 15
AB6
A
312 320Right-handed alpha
Helix 16
AB7
A
321 324Right-handed 310
Helix 17
AB8
A
368 376Right-handed alpha
Helix 18
AB9
A
389 401Right-handed alpha
Helix 19
AC1
A
405 416Right-handed alpha
Helix 20
AC2
A
422 440Right-handed alpha
Helix 21
AC3
A
440 454Right-handed alpha
Helix 22
AC4
A
473 477Right-handed 310
Helix 23
AC5
A
483 488Right-handed alpha
Helix 24
AC6
A
489 493Right-handed 310
Helix 25
AC7
A
499 520Right-handed alpha
Helix 26
AC8
A
553 565Right-handed alpha
Helix 27
AC9
A
566 572Right-handed alpha
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There are 2 sheets in PDB entry 6XYY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
12 15anti-parallel
Strand 3
A
57 58parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
24 33anti-parallel
Strand 3
A
95 101anti-parallel
Strand 4
A
174 178anti-parallel
Strand 5
A
141 147parallel
Strand 6
A
227 237parallel
Strand 7
A
259 263parallel
Strand 8
A
358 364parallel
Strand 9
A
457 463parallel
Strand 10
A
539 542parallel
Strand 11
A
551 552anti-parallel
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