Analysis of interatomic Contacts of Structural Units in PDB entry:
6XYZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XYZ entry

There is 1 chain in PDB entry 6XYZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 36HIS 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6XYZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 56Right-handed 310
Helix 2
AA2
A
57 61Right-handed 310
Helix 3
AA3
A
82 94Right-handed alpha
Helix 4
AA4
A
109 121Right-handed alpha
Helix 5
AA5
A
122 124Right-handed 310
Helix 6
AA6
A
125 140Right-handed alpha
Helix 7
AA7
A
150 154Right-handed 310
Helix 8
AA8
A
157 172Right-handed alpha
Helix 9
AA9
A
190 197Right-handed alpha
Helix 10
AB1
A
221 235Right-handed alpha
Helix 11
AB2
A
238 240Right-handed 310
Helix 12
AB3
A
263 270Right-handed alpha
Helix 13
AB4
A
271 274Right-handed 310
Helix 14
AB5
A
286 301Right-handed alpha
Helix 15
AB6
A
308 312Right-handed 310
Helix 16
AB7
A
318 330Right-handed alpha
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There are 2 sheets in PDB entry 6XYZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
63 71anti-parallel
Strand 3
A
98 104parallel
Strand 4
A
144 148parallel
Strand 5
A
175 181parallel
Strand 6
A
199 203parallel
Strand 7
A
242 247parallel
Strand 8
A
303 307parallel
Strand 9
A
40 46parallel
Strand 10
A
63 71parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 262first strand
Strand 2
A
249 252anti-parallel
Strand 3
A
282 283anti-parallel
Strand 4
A
278 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il