Analysis of interatomic Contacts of Structural Units in PDB entry:
6XZ8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6XZ8 entry

There are 3 chains in PDB entry 6XZ8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 34	ASN 503
B	PRO 32	GLY 504
C	THR 34	PHE 328

There are 66 helices in PDB entry 6XZ8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	41	Right-handed 310
Helix 2	AA2	A	47	59	Right-handed alpha
Helix 3	AA3	A	63	76	Right-handed alpha
Helix 4	AA4	A	93	104	Right-handed alpha
Helix 5	AA5	A	113	124	Right-handed alpha
Helix 6	AA6	A	134	149	Right-handed alpha
Helix 7	AA7	A	150	179	Right-handed alpha
Helix 8	AA8	A	188	205	Right-handed alpha
Helix 9	AA9	A	217	239	Right-handed alpha
Helix 10	AB1	A	241	249	Right-handed alpha
Helix 11	AB2	A	249	281	Right-handed alpha
Helix 12	AB3	A	288	297	Right-handed alpha
Helix 13	AB4	A	300	314	Right-handed alpha
Helix 14	AB5	A	315	333	Right-handed alpha
Helix 15	AB6	A	333	347	Right-handed alpha
Helix 16	AB7	A	347	354	Right-handed alpha
Helix 17	AB8	A	357	362	Right-handed alpha
Helix 18	AB9	A	362	376	Right-handed alpha
Helix 19	AC1	A	407	412	Right-handed alpha
Helix 20	AC2	A	426	431	Right-handed alpha
Helix 21	AC3	A	452	470	Right-handed alpha
Helix 22	AC4	B	37	41	Right-handed 310
Helix 23	AC5	B	47	59	Right-handed alpha
Helix 24	AC6	B	63	76	Right-handed alpha
Helix 25	AC7	B	93	104	Right-handed alpha
Helix 26	AC8	B	113	124	Right-handed alpha
Helix 27	AC9	B	128	132	Right-handed 310
Helix 28	AD1	B	134	149	Right-handed alpha
Helix 29	AD2	B	150	179	Right-handed alpha
Helix 30	AD3	B	188	205	Right-handed alpha
Helix 31	AD4	B	217	238	Right-handed alpha
Helix 32	AD5	B	241	249	Right-handed alpha
Helix 33	AD6	B	249	281	Right-handed alpha
Helix 34	AD7	B	288	297	Right-handed alpha
Helix 35	AD8	B	300	314	Right-handed alpha
Helix 36	AD9	B	316	333	Right-handed alpha
Helix 37	AE1	B	333	347	Right-handed alpha
Helix 38	AE2	B	347	354	Right-handed alpha
Helix 39	AE3	B	357	362	Right-handed alpha
Helix 40	AE4	B	362	376	Right-handed alpha
Helix 41	AE5	B	407	413	Right-handed alpha
Helix 42	AE6	B	424	429	Right-handed 310
Helix 43	AE7	B	435	439	Right-handed 310
Helix 44	AE8	B	452	470	Right-handed alpha
Helix 45	AE9	C	37	41	Right-handed 310
Helix 46	AF1	C	47	59	Right-handed alpha
Helix 47	AF2	C	63	76	Right-handed alpha
Helix 48	AF3	C	93	104	Right-handed alpha
Helix 49	AF4	C	113	124	Right-handed alpha
Helix 50	AF5	C	134	149	Right-handed alpha
Helix 51	AF6	C	150	179	Right-handed alpha
Helix 52	AF7	C	188	205	Right-handed alpha
Helix 53	AF8	C	217	239	Right-handed alpha
Helix 54	AF9	C	241	249	Right-handed alpha
Helix 55	AG1	C	249	281	Right-handed alpha
Helix 56	AG2	C	288	297	Right-handed alpha
Helix 57	AG3	C	300	314	Right-handed alpha
Helix 58	AG4	C	316	333	Right-handed alpha
Helix 59	AG5	C	333	347	Right-handed alpha
Helix 60	AG6	C	347	354	Right-handed alpha
Helix 61	AG7	C	357	362	Right-handed alpha
Helix 62	AG8	C	362	376	Right-handed alpha
Helix 63	AG9	C	407	412	Right-handed alpha
Helix 64	AH1	C	424	429	Right-handed 310
Helix 65	AH2	C	445	449	Right-handed 310
Helix 66	AH3	C	452	470	Right-handed alpha

There are 12 sheets in PDB entry 6XZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	82	first strand
Strand 2	A	87	91	anti-parallel
Strand 3	A	402	406	parallel
Strand 4	A	381	385	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	186	first strand
Strand 2	A	497	501	anti-parallel
Strand 3	A	471	474	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	395	397	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	485	first strand
Strand 2	A	489	491	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	82	first strand
Strand 2	B	87	91	anti-parallel
Strand 3	B	402	406	parallel
Strand 4	B	381	385	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	186	first strand
Strand 2	B	497	501	anti-parallel
Strand 3	B	471	474	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	390	392	first strand
Strand 2	B	395	397	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	483	485	first strand
Strand 2	B	489	491	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	82	first strand
Strand 2	C	87	91	anti-parallel
Strand 3	C	402	406	parallel
Strand 4	C	381	385	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	186	first strand
Strand 2	C	497	501	anti-parallel
Strand 3	C	471	474	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	390	392	first strand
Strand 2	C	395	397	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	483	485	first strand
Strand 2	C	489	491	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6XZ8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6XZ8