Analysis of interatomic Contacts of Structural Units in PDB entry:
6XZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6XZU entry

There are 2 chains in PDB entry 6XZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 121
B
 ALA 1516ASN 1663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6XZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 65Right-handed 310
Helix 2
AA2
A
74 76Right-handed 310
Helix 3
AA3
A
87 91Right-handed 310
Helix 4
AA4
B
1519 1524Right-handed 310
Helix 5
AA5
B
1528 1536Right-handed alpha
Helix 6
AA6
B
1587 1589Right-handed 310
Helix 7
AA7
B
1590 1595Right-handed alpha
Helix 8
AA8
B
1633 1638Right-handed alpha
Helix 9
AA9
B
1642 1660Right-handed alpha
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There are 3 sheets in PDB entry 6XZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
19 26anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
113 118parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
35 40anti-parallel
Strand 5
A
47 52anti-parallel
Strand 6
A
58 60anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1611 1612first strand
Strand 2
B
1619 1621anti-parallel
Strand 3
B
1581 1586parallel
Strand 4
B
1559 1570anti-parallel
Strand 5
B
1541 1554anti-parallel
Strand 6
B
1601 1607anti-parallel
Strand 7
B
1627 1631anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il