Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y2Z entry

There are 2 chains in PDB entry 6Y2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -4GLY 296
B
 HIS -4GLY 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6Y2Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 20Right-handed alpha
Helix 2
AA2
A
24 41Right-handed alpha
Helix 3
AA3
A
45 60Right-handed alpha
Helix 4
AA4
A
70 87Right-handed alpha
Helix 5
AA5
A
113 128Right-handed alpha
Helix 6
AA6
A
142 156Right-handed alpha
Helix 7
AA7
A
167 182Right-handed alpha
Helix 8
AA8
A
197 213Right-handed alpha
Helix 9
AA9
A
224 227Right-handed 310
Helix 10
AB1
A
228 238Right-handed alpha
Helix 11
AB2
A
255 266Right-handed alpha
Helix 12
AB3
A
286 296Right-handed alpha
Helix 13
AB4
B
-3 1Right-handed 310
Helix 14
AB5
B
3 20Right-handed alpha
Helix 15
AB6
B
24 42Right-handed alpha
Helix 16
AB7
B
45 60Right-handed alpha
Helix 17
AB8
B
70 88Right-handed alpha
Helix 18
AB9
B
113 128Right-handed alpha
Helix 19
AC1
B
142 156Right-handed alpha
Helix 20
AC2
B
167 182Right-handed alpha
Helix 21
AC3
B
197 213Right-handed alpha
Helix 22
AC4
B
224 227Right-handed 310
Helix 23
AC5
B
228 239Right-handed alpha
Helix 24
AC6
B
255 266Right-handed alpha
Helix 25
AC7
B
286 296Right-handed alpha
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There are 2 sheets in PDB entry 6Y2Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
132 136parallel
Strand 3
A
186 190parallel
Strand 4
A
102 108parallel
Strand 5
A
216 222parallel
Strand 6
A
243 248parallel
Strand 7
A
270 274parallel
Strand 8
A
282 284anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 160first strand
Strand 2
B
132 136parallel
Strand 3
B
186 190parallel
Strand 4
B
102 108parallel
Strand 5
B
216 222parallel
Strand 6
B
243 248parallel
Strand 7
B
270 274parallel
Strand 8
B
282 284anti-parallel
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