Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y31


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y31 entry

There are 4 chains in PDB entry 6Y31 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 296
B
 MET 1GLY 296
C
 MET 1GLY 296
D
 MET 1GLY 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6Y31. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 19Right-handed alpha
Helix 2
AA2
A
24 42Right-handed alpha
Helix 3
AA3
A
45 60Right-handed alpha
Helix 4
AA4
A
70 88Right-handed alpha
Helix 5
AA5
A
116 128Right-handed alpha
Helix 6
AA6
A
148 156Right-handed alpha
Helix 7
AA7
A
167 182Right-handed alpha
Helix 8
AA8
A
197 213Right-handed alpha
Helix 9
AA9
A
224 227Right-handed 310
Helix 10
AB1
A
228 238Right-handed alpha
Helix 11
AB2
A
255 266Right-handed alpha
Helix 12
AB3
A
286 296Right-handed alpha
Helix 13
AB4
B
3 20Right-handed alpha
Helix 14
AB5
B
24 42Right-handed alpha
Helix 15
AB6
B
45 60Right-handed alpha
Helix 16
AB7
B
70 88Right-handed alpha
Helix 17
AB8
B
115 128Right-handed alpha
Helix 18
AB9
B
142 156Right-handed alpha
Helix 19
AC1
B
167 182Right-handed alpha
Helix 20
AC2
B
197 213Right-handed alpha
Helix 21
AC3
B
224 227Right-handed 310
Helix 22
AC4
B
228 240Right-handed alpha
Helix 23
AC5
B
255 266Right-handed alpha
Helix 24
AC6
B
286 296Right-handed alpha
Helix 25
AC7
C
3 19Right-handed alpha
Helix 26
AC8
C
24 42Right-handed alpha
Helix 27
AC9
C
45 60Right-handed alpha
Helix 28
AD1
C
70 88Right-handed alpha
Helix 29
AD2
C
115 128Right-handed alpha
Helix 30
AD3
C
142 155Right-handed alpha
Helix 31
AD4
C
167 182Right-handed alpha
Helix 32
AD5
C
197 213Right-handed alpha
Helix 33
AD6
C
224 227Right-handed 310
Helix 34
AD7
C
228 238Right-handed alpha
Helix 35
AD8
C
255 266Right-handed alpha
Helix 36
AD9
C
286 296Right-handed alpha
Helix 37
AE1
D
3 19Right-handed alpha
Helix 38
AE2
D
24 42Right-handed alpha
Helix 39
AE3
D
45 60Right-handed alpha
Helix 40
AE4
D
70 88Right-handed alpha
Helix 41
AE5
D
115 128Right-handed alpha
Helix 42
AE6
D
142 156Right-handed alpha
Helix 43
AE7
D
167 182Right-handed alpha
Helix 44
AE8
D
197 213Right-handed alpha
Helix 45
AE9
D
224 227Right-handed 310
Helix 46
AF1
D
228 238Right-handed alpha
Helix 47
AF2
D
255 266Right-handed alpha
Helix 48
AF3
D
286 296Right-handed alpha
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There are 4 sheets in PDB entry 6Y31. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
186 190parallel
Strand 3
A
102 108parallel
Strand 4
A
216 222parallel
Strand 5
A
243 248parallel
Strand 6
A
270 274parallel
Strand 7
A
282 284anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 161first strand
Strand 2
B
132 136parallel
Strand 3
B
186 190parallel
Strand 4
B
102 108parallel
Strand 5
B
216 222parallel
Strand 6
B
243 248parallel
Strand 7
B
270 274parallel
Strand 8
B
282 284anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
159 160first strand
Strand 2
C
132 136parallel
Strand 3
C
186 190parallel
Strand 4
C
102 108parallel
Strand 5
C
216 222parallel
Strand 6
C
243 248parallel
Strand 7
C
270 274parallel
Strand 8
C
282 284anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
159 160first strand
Strand 2
D
132 136parallel
Strand 3
D
186 190parallel
Strand 4
D
102 108parallel
Strand 5
D
216 222parallel
Strand 6
D
243 248parallel
Strand 7
D
270 274parallel
Strand 8
D
282 284anti-parallel
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