Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y32

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Y32 entry

There are 5 chains in PDB entry 6Y32 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 22	GLY 296
B	MET 330	ALA 638
C	ILE 22	GLY 296
D	MET 330	ALA 638
E	ILE 22	PHE 179

There are 91 helices in PDB entry 6Y32. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	42	Right-handed alpha
Helix 2	AA2	A	45	59	Right-handed alpha
Helix 3	AA3	A	70	88	Right-handed alpha
Helix 4	AA4	A	113	128	Right-handed alpha
Helix 5	AA5	A	143	155	Right-handed alpha
Helix 6	AA6	A	167	182	Right-handed alpha
Helix 7	AA7	A	198	213	Right-handed alpha
Helix 8	AA8	A	228	240	Right-handed alpha
Helix 9	AA9	A	257	267	Right-handed alpha
Helix 10	AB1	A	286	296	Right-handed alpha
Helix 11	AB2	B	331	352	Right-handed alpha
Helix 12	AB3	B	355	371	Right-handed alpha
Helix 13	AB4	B	378	398	Right-handed alpha
Helix 14	AB5	B	404	416	Right-handed alpha
Helix 15	AB6	B	430	445	Right-handed alpha
Helix 16	AB7	B	460	473	Right-handed alpha
Helix 17	AB8	B	474	476	Right-handed 310
Helix 18	AB9	B	497	513	Right-handed alpha
Helix 19	AC1	B	528	543	Right-handed alpha
Helix 20	AC2	B	557	573	Right-handed alpha
Helix 21	AC3	B	598	607	Right-handed alpha
Helix 22	AC4	B	627	638	Right-handed alpha
Helix 23	AC5	C	23	42	Right-handed alpha
Helix 24	AC6	C	45	61	Right-handed alpha
Helix 25	AC7	C	71	88	Right-handed alpha
Helix 26	AC8	C	113	128	Right-handed alpha
Helix 27	AC9	C	143	155	Right-handed alpha
Helix 28	AD1	C	167	182	Right-handed alpha
Helix 29	AD2	C	198	213	Right-handed alpha
Helix 30	AD3	C	228	240	Right-handed alpha
Helix 31	AD4	C	257	267	Right-handed alpha
Helix 32	AD5	C	286	295	Right-handed alpha
Helix 33	AD6	D	333	352	Right-handed alpha
Helix 34	AD7	D	355	371	Right-handed alpha
Helix 35	AD8	D	378	398	Right-handed alpha
Helix 36	AD9	D	404	415	Right-handed alpha
Helix 37	AE1	D	430	445	Right-handed alpha
Helix 38	AE2	D	460	476	Right-handed alpha
Helix 39	AE3	D	477	482	Right-handed 310
Helix 40	AE4	D	497	513	Right-handed alpha
Helix 41	AE5	D	528	543	Right-handed alpha
Helix 42	AE6	D	557	573	Right-handed alpha
Helix 43	AE7	D	589	593	Right-handed 310
Helix 44	AE8	D	598	607	Right-handed alpha
Helix 45	AE9	D	627	638	Right-handed alpha
Helix 46	AF1	E	23	42	Right-handed alpha
Helix 47	AF2	E	45	61	Right-handed alpha
Helix 48	AF3	E	71	88	Right-handed alpha
Helix 49	AF4	E	113	128	Right-handed alpha
Helix 50	AF5	E	143	155	Right-handed alpha
Helix 51	AF6	E	167	182	Right-handed alpha
Helix 52	AF7	E	198	213	Right-handed alpha
Helix 53	AF8	E	228	240	Right-handed alpha
Helix 54	AF9	E	257	267	Right-handed alpha
Helix 55	AG1	E	286	296	Right-handed alpha
Helix 56	AG2	F	332	352	Right-handed alpha
Helix 57	AG3	F	355	370	Right-handed alpha
Helix 58	AG4	F	379	398	Right-handed alpha
Helix 59	AG5	F	404	415	Right-handed alpha
Helix 60	AG6	F	430	445	Right-handed alpha
Helix 61	AG7	F	460	476	Right-handed alpha
Helix 62	AG8	F	477	482	Right-handed alpha
Helix 63	AG9	F	497	513	Right-handed alpha
Helix 64	AH1	F	528	543	Right-handed alpha
Helix 65	AH2	F	557	573	Right-handed alpha
Helix 66	AH3	F	589	593	Right-handed 310
Helix 67	AH4	F	598	607	Right-handed alpha
Helix 68	AH5	F	627	637	Right-handed alpha
Helix 69	AH6	G	23	42	Right-handed alpha
Helix 70	AH7	G	45	60	Right-handed alpha
Helix 71	AH8	G	72	88	Right-handed alpha
Helix 72	AH9	G	113	128	Right-handed alpha
Helix 73	AI1	G	143	155	Right-handed alpha
Helix 74	AI2	G	167	182	Right-handed alpha
Helix 75	AI3	G	198	213	Right-handed alpha
Helix 76	AI4	G	228	240	Right-handed alpha
Helix 77	AI5	G	258	267	Right-handed alpha
Helix 78	AI6	G	286	296	Right-handed alpha
Helix 79	AI7	H	332	352	Right-handed alpha
Helix 80	AI8	H	355	370	Right-handed alpha
Helix 81	AI9	H	377	398	Right-handed alpha
Helix 82	AJ1	H	404	416	Right-handed alpha
Helix 83	AJ2	H	430	445	Right-handed alpha
Helix 84	AJ3	H	460	473	Right-handed alpha
Helix 85	AJ4	H	474	476	Right-handed 310
Helix 86	AJ5	H	497	513	Right-handed alpha
Helix 87	AJ6	H	528	543	Right-handed alpha
Helix 88	AJ7	H	557	573	Right-handed alpha
Helix 89	AJ8	H	589	593	Right-handed 310
Helix 90	AJ9	H	598	607	Right-handed alpha
Helix 91	AK1	H	627	638	Right-handed alpha

There are 8 sheets in PDB entry 6Y32. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	160	first strand
Strand 2	A	132	136	parallel
Strand 3	A	186	190	parallel
Strand 4	A	102	108	parallel
Strand 5	A	216	222	parallel
Strand 6	A	244	248	parallel
Strand 7	A	270	274	parallel
Strand 8	A	282	284	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	490	first strand
Strand 2	B	449	454	parallel
Strand 3	B	516	521	parallel
Strand 4	B	419	424	parallel
Strand 5	B	546	552	parallel
Strand 6	B	584	588	parallel
Strand 7	B	611	615	parallel
Strand 8	B	623	624	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	160	first strand
Strand 2	C	132	137	parallel
Strand 3	C	186	191	parallel
Strand 4	C	102	108	parallel
Strand 5	C	216	222	parallel
Strand 6	C	242	248	parallel
Strand 7	C	270	274	parallel
Strand 8	C	282	284	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	487	490	first strand
Strand 2	D	449	453	parallel
Strand 3	D	516	520	parallel
Strand 4	D	419	425	parallel
Strand 5	D	546	552	parallel
Strand 6	D	584	588	parallel
Strand 7	D	611	615	parallel
Strand 8	D	623	624	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	160	first strand
Strand 2	E	132	137	parallel
Strand 3	E	186	191	parallel
Strand 4	E	102	108	parallel
Strand 5	E	216	222	parallel
Strand 6	E	242	248	parallel
Strand 7	E	270	274	parallel
Strand 8	E	282	284	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	487	490	first strand
Strand 2	F	449	454	parallel
Strand 3	F	516	521	parallel
Strand 4	F	419	424	parallel
Strand 5	F	546	552	parallel
Strand 6	F	584	588	parallel
Strand 7	F	611	615	parallel
Strand 8	F	623	624	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	159	160	first strand
Strand 2	G	132	137	parallel
Strand 3	G	186	191	parallel
Strand 4	G	102	108	parallel
Strand 5	G	216	222	parallel
Strand 6	G	242	248	parallel
Strand 7	G	270	274	parallel
Strand 8	G	282	284	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	487	490	first strand
Strand 2	H	449	453	parallel
Strand 3	H	516	520	parallel
Strand 4	H	419	424	parallel
Strand 5	H	546	552	parallel
Strand 6	H	584	588	parallel
Strand 7	H	611	615	parallel
Strand 8	H	623	624	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Y32

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y32