Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y3C entry

There is 1 chain in PDB entry 6Y3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28ASP 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6Y3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 39Right-handed 310
Helix 2
AA2
A
73 81Right-handed alpha
Helix 3
AA3
A
85 93Right-handed alpha
Helix 4
AA4
A
96 105Right-handed alpha
Helix 5
AA5
A
107 122Right-handed alpha
Helix 6
AA6
A
138 144Right-handed alpha
Helix 7
AA7
A
173 181Right-handed alpha
Helix 8
AA8
A
195 207Right-handed alpha
Helix 9
AA9
A
230 235Right-handed alpha
Helix 10
AB1
A
238 245Right-handed alpha
Helix 11
AB2
A
291 294Right-handed 310
Helix 12
AB3
A
295 320Right-handed alpha
Helix 13
AB4
A
324 347Right-handed alpha
Helix 14
AB5
A
347 354Right-handed alpha
Helix 15
AB6
A
362 367Right-handed 310
Helix 16
AB7
A
378 385Right-handed alpha
Helix 17
AB8
A
387 391Right-handed 310
Helix 18
AB9
A
403 408Right-handed alpha
Helix 19
AC1
A
412 427Right-handed alpha
Helix 20
AC2
A
441 443Right-handed 310
Helix 21
AC3
A
444 458Right-handed alpha
Helix 22
AC4
A
462 470Right-handed alpha
Helix 23
AC5
A
478 483Right-handed alpha
Helix 24
AC6
A
484 496Right-handed alpha
Helix 25
AC7
A
497 501Right-handed 310
Helix 26
AC8
A
502 509Right-handed alpha
Helix 27
AC9
A
519 535Right-handed alpha
Helix 28
AD1
A
537 541Right-handed 310
Helix 29
AD2
A
552 560Right-handed alpha
Helix 30
AD3
A
564 569Right-handed alpha
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There are 4 sheets in PDB entry 6Y3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
54 58anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
71 72anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
149 150anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
260 262anti-parallel
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