Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y68 entry

There is 1 chain in PDB entry 6Y68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 657THR 1069
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6Y68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
670 672Right-handed 310
Helix 2
AA2
A
741 745Right-handed 310
Helix 3
AA3
A
747 752Right-handed 310
Helix 4
AA4
A
854 858Right-handed 310
Helix 5
AA5
A
914 921Right-handed alpha
Helix 6
AA6
A
922 926Right-handed 310
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There are 9 sheets in PDB entry 6Y68. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 694first strand
Strand 2
A
704 710anti-parallel
Strand 3
A
805 812anti-parallel
Strand 4
A
815 822anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
935 937first strand
Strand 2
A
940 943anti-parallel
Strand 3
A
714 721anti-parallel
Strand 4
A
795 805anti-parallel
Strand 5
A
848 851anti-parallel
Strand 6
A
859 862anti-parallel
Strand 7
A
927 929anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 737first strand
Strand 2
A
780 788anti-parallel
Strand 3
A
754 761anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 828first strand
Strand 2
A
832 837anti-parallel
Strand 3
A
951 959anti-parallel
Strand 4
A
674 683anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
879 881first strand
Strand 2
A
884 886anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
893 897first strand
Strand 2
A
905 909anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1028 1036first strand
Strand 2
A
991 1000anti-parallel
Strand 3
A
973 983anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1020 1026first strand
Strand 2
A
1004 1012anti-parallel
Strand 3
A
1046 1048anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
723 727first strand
Strand 2
A
791 796anti-parallel
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