Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y6A entry

There are 40 chains in PDB entry 6Y6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 24LYS 290
B
 ILE 24LYS 290
C
 ILE 24LYS 290
D
 ILE 24LYS 290
E
 GLY 22ASN 291
F
 GLY 23LYS 290
G
 ILE 24LYS 290
H
 ILE 24LYS 290
I
 ILE 24ASN 291
J
 ILE 24LYS 290
K
 ILE 24LYS 290
L
 GLY 23LYS 290
M
 GLY 22LYS 290
N
 ILE 24LYS 290
O
 GLY 22LYS 290
P
 GLY 23ASN 291
Q
 GLY 23LYS 290
R
 GLY 23ASN 291
S
 ILE 24LYS 290
T
 GLY 22LYS 290
U
 ILE 24LYS 290
V
 GLY 23LYS 290
W
 GLY 23LYS 290
X
 ILE 24LYS 290
Y
 ILE 24LYS 290
Z
 ILE 24LYS 290
a
 ILE 24LYS 290
b
 GLU 25LYS 290
c
 GLU 25LYS 290
d
 GLU 25LYS 290
e
 ILE 24LYS 290
f
 GLY 23LYS 290
g
 GLY 22LYS 290
h
 ILE 24LYS 290
i
 ILE 24LYS 290
j
 ILE 24LYS 290
k
 ILE 24LYS 290
l
 GLU 25VAL 289
m
 ILE 24LYS 290
n
 ILE 24LYS 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are196 helices in PDB entry 6Y6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 73Right-handed 310
Helix 2
AA2
A
109 114Right-handed 310
Helix 3
AA3
A
123 127Right-handed 310
Helix 4
AA4
A
176 181Right-handed 310
Helix 5
AA5
A
247 249Right-handed 310
Helix 6
AA6
B
69 73Right-handed 310
Helix 7
AA7
B
109 114Right-handed 310
Helix 8
AA8
B
123 127Right-handed 310
Helix 9
AA9
B
176 181Right-handed 310
Helix 10
AB1
B
247 249Right-handed 310
Helix 11
AB2
C
69 73Right-handed 310
Helix 12
AB3
C
109 114Right-handed 310
Helix 13
AB4
C
123 127Right-handed 310
Helix 14
AB5
C
176 181Right-handed 310
Helix 15
AB6
C
247 249Right-handed 310
Helix 16
AB7
D
69 73Right-handed 310
Helix 17
AB8
D
109 114Right-handed 310
Helix 18
AB9
D
123 127Right-handed 310
Helix 19
AC1
D
176 181Right-handed 310
Helix 20
AC2
D
247 249Right-handed 310
Helix 21
AC3
E
69 73Right-handed 310
Helix 22
AC4
E
109 114Right-handed 310
Helix 23
AC5
E
123 127Right-handed 310
Helix 24
AC6
E
176 181Right-handed 310
Helix 25
AC7
E
247 249Right-handed 310
Helix 26
AC8
F
69 73Right-handed 310
Helix 27
AC9
F
109 114Right-handed 310
Helix 28
AD1
F
123 127Right-handed 310
Helix 29
AD2
F
176 181Right-handed 310
Helix 30
AD3
F
247 249Right-handed 310
Helix 31
AD4
G
69 73Right-handed 310
Helix 32
AD5
G
109 114Right-handed 310
Helix 33
AD6
G
123 127Right-handed 310
Helix 34
AD7
G
176 181Right-handed 310
Helix 35
AD8
G
247 249Right-handed 310
Helix 36
AD9
H
69 73Right-handed 310
Helix 37
AE1
H
109 114Right-handed 310
Helix 38
AE2
H
123 127Right-handed 310
Helix 39
AE3
H
176 181Right-handed 310
Helix 40
AE4
H
247 249Right-handed 310
Helix 41
AE5
I
69 73Right-handed 310
Helix 42
AE6
I
109 114Right-handed 310
Helix 43
AE7
I
123 127Right-handed 310
Helix 44
AE8
I
176 181Right-handed 310
Helix 45
AE9
I
247 249Right-handed 310
Helix 46
AF1
J
69 73Right-handed 310
Helix 47
AF2
J
109 114Right-handed 310
Helix 48
AF3
J
123 127Right-handed 310
Helix 49
AF4
J
176 181Right-handed 310
Helix 50
AF5
J
247 249Right-handed 310
Helix 51
AF6
K
69 73Right-handed 310
Helix 52
AF7
K
109 114Right-handed 310
Helix 53
AF8
K
123 127Right-handed 310
Helix 54
AF9
K
176 181Right-handed 310
Helix 55
AG1
K
247 249Right-handed 310
Helix 56
AG2
L
69 73Right-handed 310
Helix 57
AG3
L
109 114Right-handed 310
Helix 58
AG4
L
123 127Right-handed 310
Helix 59
AG5
L
176 181Right-handed 310
Helix 60
AG6
L
247 249Right-handed 310
Helix 61
AG7
M
69 73Right-handed 310
Helix 62
AG8
M
109 114Right-handed 310
Helix 63
AG9
M
123 127Right-handed 310
Helix 64
AH1
M
176 181Right-handed 310
Helix 65
AH2
M
247 249Right-handed 310
Helix 66
AH3
N
69 73Right-handed 310
Helix 67
AH4
N
109 114Right-handed 310
Helix 68
AH5
N
123 127Right-handed 310
Helix 69
AH6
N
176 181Right-handed 310
Helix 70
AH7
N
247 249Right-handed 310
Helix 71
AH8
O
69 73Right-handed 310
Helix 72
AH9
O
109 114Right-handed 310
Helix 73
AI1
O
123 127Right-handed 310
Helix 74
AI2
O
176 181Right-handed 310
Helix 75
AI3
O
247 249Right-handed 310
Helix 76
AI4
P
69 73Right-handed 310
Helix 77
AI5
P
109 114Right-handed 310
Helix 78
AI6
P
123 127Right-handed 310
Helix 79
AI7
P
176 181Right-handed 310
Helix 80
AI8
P
247 249Right-handed 310
Helix 81
AI9
Q
69 73Right-handed 310
Helix 82
AJ1
Q
109 114Right-handed 310
Helix 83
AJ2
Q
123 127Right-handed 310
Helix 84
AJ3
Q
176 181Right-handed 310
Helix 85
AJ4
Q
247 249Right-handed 310
Helix 86
AJ5
R
69 73Right-handed 310
Helix 87
AJ6
R
109 114Right-handed 310
Helix 88
AJ7
R
123 127Right-handed 310
Helix 89
AJ8
R
176 181Right-handed 310
Helix 90
AJ9
R
247 249Right-handed 310
Helix 91
AK1
S
69 73Right-handed 310
Helix 92
AK2
S
109 114Right-handed 310
Helix 93
AK3
S
123 127Right-handed 310
Helix 94
AK4
S
176 181Right-handed 310
Helix 95
AK5
S
247 249Right-handed 310
Helix 96
AK6
T
69 73Right-handed 310
Helix 97
AK7
T
109 114Right-handed 310
Helix 98
AK8
T
123 127Right-handed 310
Helix 99
AK9
T
176 181Right-handed 310
Helix 100
AL1
T
247 249Right-handed 310
Helix 101
AL2
U
69 73Right-handed 310
Helix 102
AL3
U
109 114Right-handed 310
Helix 103
AL4
U
123 127Right-handed 310
Helix 104
AL5
U
176 181Right-handed 310
Helix 105
AL6
U
247 249Right-handed 310
Helix 106
AL7
V
69 73Right-handed 310
Helix 107
AL8
V
109 114Right-handed 310
Helix 108
AL9
V
123 127Right-handed 310
Helix 109
AM1
V
176 181Right-handed 310
Helix 110
AM2
V
247 249Right-handed 310
Helix 111
AM3
W
69 73Right-handed 310
Helix 112
AM4
W
109 114Right-handed 310
Helix 113
AM5
W
123 127Right-handed 310
Helix 114
AM6
W
176 181Right-handed 310
Helix 115
AM7
W
247 249Right-handed 310
Helix 116
AM8
X
69 73Right-handed 310
Helix 117
AM9
X
109 114Right-handed 310
Helix 118
AN1
X
123 127Right-handed 310
Helix 119
AN2
X
176 181Right-handed 310
Helix 120
AN3
X
247 249Right-handed 310
Helix 121
AN4
Y
69 73Right-handed 310
Helix 122
AN5
Y
109 114Right-handed 310
Helix 123
AN6
Y
123 127Right-handed 310
Helix 124
AN7
Y
176 181Right-handed 310
Helix 125
AN8
Y
247 249Right-handed 310
Helix 126
AN9
Z
69 73Right-handed 310
Helix 127
AO1
Z
109 114Right-handed 310
Helix 128
AO2
Z
123 127Right-handed 310
Helix 129
AO3
Z
176 181Right-handed 310
Helix 130
AO4
Z
247 249Right-handed 310
Helix 131
AO5
a
69 73Right-handed 310
Helix 132
AO6
a
109 114Right-handed 310
Helix 133
AO7
a
123 127Right-handed 310
Helix 134
AO8
a
176 181Right-handed 310
Helix 135
AO9
a
247 249Right-handed 310
Helix 136
AP1
b
69 73Right-handed 310
Helix 137
AP2
b
109 114Right-handed 310
Helix 138
AP3
b
123 127Right-handed 310
Helix 139
AP4
b
176 181Right-handed 310
Helix 140
AP5
b
247 249Right-handed 310
Helix 141
AP6
c
69 73Right-handed 310
Helix 142
AP7
c
109 114Right-handed 310
Helix 143
AP8
c
123 127Right-handed 310
Helix 144
AP9
c
176 181Right-handed 310
Helix 145
AQ1
c
247 249Right-handed 310
Helix 146
AQ2
d
69 73Right-handed 310
Helix 147
AQ3
d
109 114Right-handed 310
Helix 148
AQ4
d
123 127Right-handed 310
Helix 149
AQ5
d
176 181Right-handed 310
Helix 150
AQ6
d
247 249Right-handed 310
Helix 151
AQ7
e
69 73Right-handed 310
Helix 152
AQ8
e
109 114Right-handed 310
Helix 153
AQ9
e
123 127Right-handed 310
Helix 154
AR1
e
176 181Right-handed 310
Helix 155
AR2
e
247 249Right-handed 310
Helix 156
AR3
f
69 73Right-handed 310
Helix 157
AR4
f
109 114Right-handed 310
Helix 158
AR5
f
123 127Right-handed 310
Helix 159
AR6
f
176 181Right-handed 310
Helix 160
AR7
f
247 249Right-handed 310
Helix 161
AR8
g
69 73Right-handed 310
Helix 162
AR9
g
109 114Right-handed 310
Helix 163
AS1
g
123 127Right-handed 310
Helix 164
AS2
g
176 181Right-handed 310
Helix 165
AS3
g
247 249Right-handed 310
Helix 166
AS4
h
69 73Right-handed 310
Helix 167
AS5
h
109 114Right-handed 310
Helix 168
AS6
h
123 127Right-handed 310
Helix 169
AS7
h
176 181Right-handed 310
Helix 170
AS8
h
247 249Right-handed 310
Helix 171
AS9
i
69 73Right-handed 310
Helix 172
AT1
i
109 114Right-handed 310
Helix 173
AT2
i
123 127Right-handed 310
Helix 174
AT3
i
176 181Right-handed 310
Helix 175
AT4
i
247 249Right-handed 310
Helix 176
AT5
j
69 73Right-handed 310
Helix 177
AT6
j
109 114Right-handed 310
Helix 178
AT7
j
123 127Right-handed 310
Helix 179
AT8
j
176 181Right-handed 310
Helix 180
AT9
j
247 249Right-handed 310
Helix 181
AU1
k
69 73Right-handed 310
Helix 182
AU2
k
109 114Right-handed 310
Helix 183
AU3
k
176 181Right-handed 310
Helix 184
AU4
k
247 249Right-handed 310
Helix 185
AU5
l
123 127Right-handed 310
Helix 186
AU6
l
247 249Right-handed 310
Helix 187
AU7
m
69 73Right-handed 310
Helix 188
AU8
m
109 114Right-handed 310
Helix 189
AU9
m
123 127Right-handed 310
Helix 190
AV1
m
176 181Right-handed 310
Helix 191
AV2
m
247 249Right-handed 310
Helix 192
AV3
n
69 73Right-handed 310
Helix 193
AV4
n
109 114Right-handed 310
Helix 194
AV5
n
123 127Right-handed 310
Helix 195
AV6
n
176 181Right-handed 310
Helix 196
AV7
n
247 249Right-handed 310
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