Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y6G entry

There is 1 chain in PDB entry 6Y6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6Y6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
49 53Right-handed 310
Helix 3
AA3
A
66 86Right-handed alpha
Helix 4
AA4
A
94 109Right-handed alpha
Helix 5
AA5
A
121 125Right-handed 310
Helix 6
AA6
A
127 134Right-handed 310
Helix 7
AA7
A
141 151Right-handed alpha
Helix 8
AA8
A
154 156Right-handed 310
Helix 9
AA9
A
196 206Right-handed alpha
Helix 10
AB1
A
221 233Right-handed alpha
Helix 11
AB2
A
234 236Right-handed 310
Helix 12
AB3
A
246 254Right-handed alpha
Helix 13
AB4
A
271 280Right-handed alpha
Helix 14
AB5
A
292 297Right-handed alpha
Helix 15
AB6
A
310 324Right-handed alpha
Helix 16
AB7
A
329 340Right-handed 310
Helix 17
AB8
A
341 355Right-handed alpha
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There are 2 sheets in PDB entry 6Y6G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 61first strand
Strand 2
A
36 42parallel
Strand 3
A
3 8parallel
Strand 4
A
89 92parallel
Strand 5
A
113 116parallel
Strand 6
A
136 139parallel
Strand 7
A
158 160parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 240first strand
Strand 2
A
211 216parallel
Strand 3
A
181 186parallel
Strand 4
A
260 263parallel
Strand 5
A
284 287parallel
Strand 6
A
303 306parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il