Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y7G entry

There are 2 chains in PDB entry 6Y7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 25GLU 197
B
 ASN 26GLU 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6Y7G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 52Right-handed alpha
Helix 2
AA2
A
114 120Right-handed alpha
Helix 3
AA3
A
120 131Right-handed alpha
Helix 4
AA4
A
147 151Right-handed 310
Helix 5
AA5
A
154 166Right-handed alpha
Helix 6
AA6
A
179 197Right-handed alpha
Helix 7
AA7
B
42 53Right-handed alpha
Helix 8
AA8
B
90 102Right-handed alpha
Helix 9
AA9
B
114 120Right-handed alpha
Helix 10
AB1
B
120 131Right-handed alpha
Helix 11
AB2
B
154 166Right-handed alpha
Helix 12
AB3
B
179 196Right-handed alpha
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There are 2 sheets in PDB entry 6Y7G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 74first strand
Strand 2
A
77 84anti-parallel
Strand 3
A
29 36parallel
Strand 4
A
105 111parallel
Strand 5
A
137 143parallel
Strand 6
A
168 171parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 74first strand
Strand 2
B
77 84anti-parallel
Strand 3
B
29 36parallel
Strand 4
B
105 111parallel
Strand 5
B
137 143parallel
Strand 6
B
168 171parallel
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