Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y86 entry

There is 1 chain in PDB entry 6Y86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6Y86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
13 19Right-handed alpha
Helix 3
AA3
A
198 206Right-handed alpha
Helix 4
AA4
A
209 219Right-handed alpha
Helix 5
AA5
A
227 246Right-handed alpha
Helix 6
AA6
A
247 263Right-handed alpha
Helix 7
AA7
A
265 280Right-handed alpha
Helix 8
AA8
A
281 286Right-handed alpha
Helix 9
AA9
A
300 306Right-handed alpha
Helix 10
AB1
A
313 334Right-handed alpha
Helix 11
AB2
A
336 343Right-handed alpha
Helix 12
AB3
A
356 378Right-handed alpha
Helix 13
AB4
A
382 393Right-handed alpha
Helix 14
AB5
A
394 399Right-handed alpha
Helix 15
AB6
A
403 422Right-handed alpha
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There are 4 sheets in PDB entry 6Y86. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 29first strand
Strand 2
A
32 36anti-parallel
Strand 3
A
40 45anti-parallel
Strand 4
A
50 56anti-parallel
Strand 5
A
65 66anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
74 76anti-parallel
Strand 3
A
136 138anti-parallel
Strand 4
A
182 184anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 91first strand
Strand 2
A
102 108anti-parallel
Strand 3
A
113 119anti-parallel
Strand 4
A
125 131anti-parallel
Strand 5
A
187 196anti-parallel
Strand 6
A
166 171anti-parallel
Strand 7
A
156 161anti-parallel
Strand 8
A
151 152anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
98 99anti-parallel
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