Analysis of interatomic Contacts of Structural Units in PDB entry:
6Y93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Y93 entry

There are 4 chains in PDB entry 6Y93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 126ARG 230
B
 THR 113GLY 228
C
 G 1 C 22
D
 G 1 C 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6Y93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
128 143Right-handed alpha
Helix 2
AA2
A
146 155Right-handed alpha
Helix 3
AA3
A
157 166Right-handed alpha
Helix 4
AA4
A
167 170Right-handed 310
Helix 5
AA5
A
171 180Right-handed alpha
Helix 6
AA6
A
184 192Right-handed alpha
Helix 7
AA7
A
196 211Right-handed alpha
Helix 8
AA8
A
213 229Right-handed alpha
Helix 9
AA9
B
114 125Right-handed alpha
Helix 10
AB1
B
128 143Right-handed alpha
Helix 11
AB2
B
146 155Right-handed alpha
Helix 12
AB3
B
157 166Right-handed alpha
Helix 13
AB4
B
167 170Right-handed 310
Helix 14
AB5
B
171 180Right-handed alpha
Helix 15
AB6
B
184 192Right-handed alpha
Helix 16
AB7
B
196 211Right-handed alpha
Helix 17
AB8
B
213 228Right-handed alpha
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There are no sheets in PDB entry 6Y93
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il