Analysis of interatomic Contacts of Structural Units in PDB entry:
6YEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YEJ entry

There is 1 chain in PDB entry 6YEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 146GLN 3153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are136 helices in PDB entry 6YEJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
148 163Right-handed alpha
Helix 2
AA2
A
171 179Right-handed alpha
Helix 3
AA3
A
181 189Right-handed alpha
Helix 4
AA4
A
191 196Right-handed alpha
Helix 5
AA5
A
202 208Right-handed alpha
Helix 6
AA6
A
213 228Right-handed alpha
Helix 7
AA7
A
232 237Right-handed alpha
Helix 8
AA8
A
238 243Right-handed alpha
Helix 9
AA9
A
244 248Right-handed 310
Helix 10
AB1
A
252 259Right-handed alpha
Helix 11
AB2
A
259 267Right-handed alpha
Helix 12
AB3
A
274 279Right-handed alpha
Helix 13
AB4
A
280 282Right-handed 310
Helix 14
AB5
A
285 290Right-handed alpha
Helix 15
AB6
A
295 308Right-handed alpha
Helix 16
AB7
A
314 319Right-handed alpha
Helix 17
AB8
A
321 329Right-handed alpha
Helix 18
AB9
A
338 347Right-handed alpha
Helix 19
AC1
A
361 366Right-handed alpha
Helix 20
AC2
A
372 376Right-handed 310
Helix 21
AC3
A
404 414Right-handed alpha
Helix 22
AC4
A
439 448Right-handed alpha
Helix 23
AC5
A
451 456Right-handed alpha
Helix 24
AC6
A
730 742Right-handed alpha
Helix 25
AC7
A
766 775Right-handed alpha
Helix 26
AC8
A
802 807Right-handed 310
Helix 27
AC9
A
823 832Right-handed alpha
Helix 28
AD1
A
837 847Right-handed alpha
Helix 29
AD2
A
858 866Right-handed alpha
Helix 30
AD3
A
884 889Right-handed alpha
Helix 31
AD4
A
895 905Right-handed alpha
Helix 32
AD5
A
906 910Right-handed 310
Helix 33
AD6
A
930 938Right-handed alpha
Helix 34
AD7
A
944 948Right-handed 310
Helix 35
AD8
A
953 961Right-handed alpha
Helix 36
AD9
A
964 969Right-handed 310
Helix 37
AE1
A
971 978Right-handed alpha
Helix 38
AE2
A
980 985Right-handed alpha
Helix 39
AE3
A
986 989Right-handed 310
Helix 40
AE4
A
1000 1005Right-handed alpha
Helix 41
AE5
A
1048 1053Right-handed alpha
Helix 42
AE6
A
1069 1075Right-handed alpha
Helix 43
AE7
A
1092 1097Right-handed alpha
Helix 44
AE8
A
1117 1126Right-handed alpha
Helix 45
AE9
A
1129 1132Right-handed 310
Helix 46
AF1
A
1133 1138Right-handed alpha
Helix 47
AF2
A
1151 1156Right-handed alpha
Helix 48
AF3
A
1185 1196Right-handed alpha
Helix 49
AF4
A
1203 1208Right-handed alpha
Helix 50
AF5
A
1288 1292Right-handed 310
Helix 51
AF6
A
1323 1330Right-handed alpha
Helix 52
AF7
A
1333 1338Right-handed alpha
Helix 53
AF8
A
1340 1351Right-handed alpha
Helix 54
AF9
A
1360 1367Right-handed alpha
Helix 55
AG1
A
1410 1415Right-handed alpha
Helix 56
AG2
A
1418 1423Right-handed alpha
Helix 57
AG3
A
1475 1488Right-handed alpha
Helix 58
AG4
A
1522 1529Right-handed alpha
Helix 59
AG5
A
1530 1535Right-handed alpha
Helix 60
AG6
A
1540 1543Right-handed 310
Helix 61
AG7
A
1544 1554Right-handed alpha
Helix 62
AG8
A
1567 1581Right-handed alpha
Helix 63
AG9
A
1593 1599Right-handed alpha
Helix 64
AH1
A
1613 1628Right-handed alpha
Helix 65
AH2
A
1634 1639Right-handed alpha
Helix 66
AH3
A
1639 1650Right-handed alpha
Helix 67
AH4
A
1650 1661Right-handed alpha
Helix 68
AH5
A
1661 1669Right-handed alpha
Helix 69
AH6
A
1680 1687Right-handed alpha
Helix 70
AH7
A
1687 1692Right-handed alpha
Helix 71
AH8
A
1700 1706Right-handed alpha
Helix 72
AH9
A
1725 1730Right-handed alpha
Helix 73
AI1
A
1732 1737Right-handed alpha
Helix 74
AI2
A
1739 1748Right-handed alpha
Helix 75
AI3
A
1762 1768Right-handed alpha
Helix 76
AI4
A
2149 2155Right-handed alpha
Helix 77
AI5
A
2156 2159Right-handed 310
Helix 78
AI6
A
2167 2174Right-handed alpha
Helix 79
AI7
A
2182 2187Right-handed alpha
Helix 80
AI8
A
2197 2210Right-handed alpha
Helix 81
AI9
A
2213 2233Right-handed alpha
Helix 82
AJ1
A
2250 2258Right-handed 310
Helix 83
AJ2
A
2264 2272Right-handed alpha
Helix 84
AJ3
A
2274 2282Right-handed alpha
Helix 85
AJ4
A
2283 2286Right-handed 310
Helix 86
AJ5
A
2294 2296Right-handed 310
Helix 87
AJ6
A
2297 2302Right-handed alpha
Helix 88
AJ7
A
2303 2308Right-handed alpha
Helix 89
AJ8
A
2311 2318Right-handed alpha
Helix 90
AJ9
A
2328 2337Right-handed alpha
Helix 91
AK1
A
2339 2346Right-handed alpha
Helix 92
AK2
A
2347 2350Right-handed 310
Helix 93
AK3
A
2351 2356Right-handed alpha
Helix 94
AK4
A
2362 2371Right-handed alpha
Helix 95
AK5
A
2404 2419Right-handed alpha
Helix 96
AK6
A
2419 2424Right-handed alpha
Helix 97
AK7
A
2430 2434Right-handed 310
Helix 98
AK8
A
2443 2449Right-handed alpha
Helix 99
AK9
A
2456 2461Right-handed alpha
Helix 100
AL1
A
2463 2469Right-handed alpha
Helix 101
AL2
A
2487 2491Right-handed 310
Helix 102
AL3
A
2493 2501Right-handed alpha
Helix 103
AL4
A
2501 2506Right-handed alpha
Helix 104
AL5
A
2511 2513Right-handed 310
Helix 105
AL6
A
2514 2524Right-handed alpha
Helix 106
AL7
A
2547 2552Right-handed alpha
Helix 107
AL8
A
2554 2563Right-handed alpha
Helix 108
AL9
A
2594 2608Right-handed alpha
Helix 109
AM1
A
2670 2675Right-handed alpha
Helix 110
AM2
A
2718 2733Right-handed alpha
Helix 111
AM3
A
2744 2758Right-handed alpha
Helix 112
AM4
A
2759 2761Right-handed 310
Helix 113
AM5
A
2764 2780Right-handed alpha
Helix 114
AM6
A
2789 2804Right-handed alpha
Helix 115
AM7
A
2807 2822Right-handed alpha
Helix 116
AM8
A
2828 2833Right-handed alpha
Helix 117
AM9
A
2834 2843Right-handed alpha
Helix 118
AN1
A
2850 2852Right-handed 310
Helix 119
AN2
A
2853 2867Right-handed alpha
Helix 120
AN3
A
2879 2884Right-handed alpha
Helix 121
AN4
A
2887 2894Right-handed alpha
Helix 122
AN5
A
2899 2913Right-handed alpha
Helix 123
AN6
A
2922 2932Right-handed alpha
Helix 124
AN7
A
2932 2939Right-handed alpha
Helix 125
AN8
A
2943 2948Right-handed alpha
Helix 126
AN9
A
2948 2956Right-handed alpha
Helix 127
AO1
A
2962 2980Right-handed alpha
Helix 128
AO2
A
3001 3018Right-handed alpha
Helix 129
AO3
A
3023 3039Right-handed alpha
Helix 130
AO4
A
3040 3050Right-handed alpha
Helix 131
AO5
A
3060 3072Right-handed alpha
Helix 132
AO6
A
3081 3093Right-handed alpha
Helix 133
AO7
A
3099 3114Right-handed alpha
Helix 134
AO8
A
3120 3122Right-handed 310
Helix 135
AO9
A
3123 3128Right-handed alpha
Helix 136
AP1
A
3135 3149Right-handed alpha
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There are no sheets in PDB entry 6YEJ

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