Analysis of interatomic Contacts of Structural Units in PDB entry:
6YET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YET entry

There is 1 chain in PDB entry 6YET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 346SER 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 6YET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
356 371Right-handed alpha
Helix 2
AA2
A
379 389Right-handed alpha
Helix 3
AA3
A
393 405Right-handed alpha
Helix 4
AA4
A
414 430Right-handed alpha
Helix 5
AA5
A
438 443Right-handed alpha
Helix 6
AA6
A
444 449Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6YET.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 378first strand
Strand 2
A
412 413anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il