Analysis of interatomic Contacts of Structural Units in PDB entry:
6YGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YGH entry

There are 6 chains in PDB entry 6YGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 SER 250LYS 262
H
 SER 250LYS 262
A
 MET 1ALA 188
B
 ASP 2ILE 193
C
 ASP 2PRO 192
D
 MET 1ILE 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6YGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
11 15Right-handed 310
Helix 3
AA3
A
22 41Right-handed alpha
Helix 4
AA4
A
44 77Right-handed alpha
Helix 5
AA5
A
92 97Right-handed alpha
Helix 6
AA6
A
103 116Right-handed alpha
Helix 7
AA7
A
120 156Right-handed alpha
Helix 8
AA8
A
157 174Right-handed alpha
Helix 9
AA9
B
3 14Right-handed alpha
Helix 10
AB1
B
22 41Right-handed alpha
Helix 11
AB2
B
44 75Right-handed alpha
Helix 12
AB3
B
92 99Right-handed alpha
Helix 13
AB4
B
104 116Right-handed alpha
Helix 14
AB5
B
120 157Right-handed alpha
Helix 15
AB6
B
158 173Right-handed alpha
Helix 16
AB7
B
186 191Right-handed alpha
Helix 17
AB8
C
3 15Right-handed alpha
Helix 18
AB9
C
22 34Right-handed alpha
Helix 19
AC1
C
34 41Right-handed alpha
Helix 20
AC2
C
44 78Right-handed alpha
Helix 21
AC3
C
92 99Right-handed alpha
Helix 22
AC4
C
104 116Right-handed alpha
Helix 23
AC5
C
120 157Right-handed alpha
Helix 24
AC6
C
157 174Right-handed alpha
Helix 25
AC7
C
186 191Right-handed alpha
Helix 26
AC8
D
2 9Right-handed alpha
Helix 27
AC9
D
22 40Right-handed alpha
Helix 28
AD1
D
44 76Right-handed alpha
Helix 29
AD2
D
93 97Right-handed 310
Helix 30
AD3
D
103 116Right-handed alpha
Helix 31
AD4
D
120 157Right-handed alpha
Helix 32
AD5
D
157 173Right-handed alpha
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There are no sheets in PDB entry 6YGH
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