Analysis of interatomic Contacts of Structural Units in PDB entry:
6YHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YHZ entry

There is 1 chain in PDB entry 6YHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 472GLY 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6YHZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
514 516Right-handed 310
Helix 2
AA2
A
525 527Right-handed 310
Helix 3
AA3
A
536 540Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6YHZ.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
518 522first strand
Strand 2
A
505 512anti-parallel
Strand 3
A
489 500anti-parallel
Strand 4
A
482 485anti-parallel
Strand 5
A
529 531anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il