Analysis of interatomic Contacts of Structural Units in PDB entry:
6YJ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YJ2 entry

There are 4 chains in PDB entry 6YJ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 24LEU 215
D
 SER 24LEU 215
A
 ASP 25CYS 214
C
 PHE 28LEU 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6YJ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
25 42Right-handed alpha
Helix 2
AA2
B
47 56Right-handed alpha
Helix 3
AA3
B
58 63Right-handed alpha
Helix 4
AA4
B
68 95Right-handed alpha
Helix 5
AA5
B
97 116Right-handed alpha
Helix 6
AA6
B
116 126Right-handed alpha
Helix 7
AA7
B
127 130Right-handed 310
Helix 8
AA8
B
131 157Right-handed alpha
Helix 9
AA9
B
161 177Right-handed alpha
Helix 10
AB1
B
178 183Right-handed alpha
Helix 11
AB2
B
184 188Right-handed 310
Helix 12
AB3
B
189 213Right-handed alpha
Helix 13
AB4
D
25 42Right-handed alpha
Helix 14
AB5
D
47 56Right-handed alpha
Helix 15
AB6
D
58 63Right-handed alpha
Helix 16
AB7
D
68 95Right-handed alpha
Helix 17
AB8
D
97 116Right-handed alpha
Helix 18
AB9
D
116 126Right-handed alpha
Helix 19
AC1
D
127 130Right-handed 310
Helix 20
AC2
D
131 157Right-handed alpha
Helix 21
AC3
D
161 177Right-handed alpha
Helix 22
AC4
D
178 183Right-handed alpha
Helix 23
AC5
D
184 188Right-handed 310
Helix 24
AC6
D
189 209Right-handed alpha
Helix 25
AC7
D
210 215Right-handed 310
Helix 26
AC8
A
26 42Right-handed alpha
Helix 27
AC9
A
47 56Right-handed alpha
Helix 28
AD1
A
58 63Right-handed alpha
Helix 29
AD2
A
68 95Right-handed alpha
Helix 30
AD3
A
97 116Right-handed alpha
Helix 31
AD4
A
116 126Right-handed alpha
Helix 32
AD5
A
127 130Right-handed 310
Helix 33
AD6
A
131 157Right-handed alpha
Helix 34
AD7
A
161 177Right-handed alpha
Helix 35
AD8
A
178 183Right-handed alpha
Helix 36
AD9
A
190 213Right-handed alpha
Helix 37
AE1
C
29 42Right-handed alpha
Helix 38
AE2
C
47 56Right-handed alpha
Helix 39
AE3
C
58 63Right-handed alpha
Helix 40
AE4
C
68 95Right-handed alpha
Helix 41
AE5
C
97 116Right-handed alpha
Helix 42
AE6
C
116 126Right-handed alpha
Helix 43
AE7
C
127 130Right-handed 310
Helix 44
AE8
C
131 157Right-handed alpha
Helix 45
AE9
C
161 177Right-handed alpha
Helix 46
AF1
C
178 183Right-handed alpha
Helix 47
AF2
C
190 210Right-handed alpha
Helix 48
AF3
C
211 215Right-handed 310
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There are no sheets in PDB entry 6YJ2
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