Analysis of interatomic Contacts of Structural Units in PDB entry:
6YJK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YJK entry

There is 1 chain in PDB entry 6YJK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLN 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 6YJK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 9Right-handed alpha
Helix 2
AA2
A
33 55Right-handed alpha
Helix 3
AA3
A
60 68Right-handed alpha
Helix 4
AA4
A
73 111Right-handed alpha
Helix 5
AA5
A
118 124Right-handed alpha
Helix 6
AA6
A
126 148Right-handed alpha
Helix 7
AA7
A
151 169Right-handed alpha
Helix 8
AA8
A
181 191Right-handed alpha
Helix 9
AA9
A
196 211Right-handed alpha
Helix 10
AB1
A
217 236Right-handed alpha
Helix 11
AB2
A
238 242Right-handed alpha
Helix 12
AB3
A
247 267Right-handed alpha
Helix 13
AB4
A
281 290Right-handed alpha
Helix 14
AB5
A
296 305Right-handed alpha
Helix 15
AB6
A
317 323Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6YJK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il