Analysis of interatomic Contacts of Structural Units in PDB entry:
6YQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YQY entry

There is 1 chain in PDB entry 6YQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ALA 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6YQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 13Right-handed alpha
Helix 2
AA2
A
26 36Right-handed alpha
Helix 3
AA3
A
47 61Right-handed alpha
Helix 4
AA4
A
72 82Right-handed alpha
Helix 5
AA5
A
93 108Right-handed alpha
Helix 6
AA6
A
118 129Right-handed alpha
Helix 7
AA7
A
143 154Right-handed alpha
Helix 8
AA8
A
164 175Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6YQY.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 24first strand
Strand 2
A
40 43parallel
Strand 3
A
66 70parallel
Strand 4
A
86 90parallel
Strand 5
A
112 116parallel
Strand 6
A
132 136parallel
Strand 7
A
157 161parallel
Strand 8
A
178 182parallel
Strand 9
A
19 24parallel
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