Analysis of interatomic Contacts of Structural Units in PDB entry:
6YSF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YSF entry

There are 7 chains in PDB entry 6YSF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 14SER 42
B
 GLY 11VAL 43
E
 THR 8VAL 259
C
 THR 8VAL 259
D
 THR 8VAL 259
F
 LYS 3VAL 259
G
 THR 8VAL 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 6YSF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 37Right-handed alpha
Helix 2
AA2
B
17 43Right-handed alpha
Helix 3
AA3
E
9 25Right-handed alpha
Helix 4
AA4
E
29 34Right-handed 310
Helix 5
AA5
E
35 54Right-handed alpha
Helix 6
AA6
E
62 67Right-handed alpha
Helix 7
AA7
E
78 92Right-handed alpha
Helix 8
AA8
E
110 119Right-handed alpha
Helix 9
AA9
E
123 173Right-handed alpha
Helix 10
AB1
E
179 202Right-handed alpha
Helix 11
AB2
E
202 232Right-handed alpha
Helix 12
AB3
E
239 246Right-handed alpha
Helix 13
AB4
E
249 258Right-handed alpha
Helix 14
AB5
C
9 24Right-handed alpha
Helix 15
AB6
C
35 54Right-handed alpha
Helix 16
AB7
C
62 71Right-handed alpha
Helix 17
AB8
C
78 92Right-handed alpha
Helix 18
AB9
C
110 119Right-handed alpha
Helix 19
AC1
C
123 172Right-handed alpha
Helix 20
AC2
C
179 234Right-handed alpha
Helix 21
AC3
C
236 246Right-handed alpha
Helix 22
AC4
C
249 256Right-handed alpha
Helix 23
AC5
D
11 24Right-handed alpha
Helix 24
AC6
D
29 34Right-handed 310
Helix 25
AC7
D
35 54Right-handed alpha
Helix 26
AC8
D
58 64Right-handed 310
Helix 27
AC9
D
65 70Right-handed alpha
Helix 28
AD1
D
78 92Right-handed alpha
Helix 29
AD2
D
101 105Right-handed 310
Helix 30
AD3
D
111 119Right-handed alpha
Helix 31
AD4
D
123 172Right-handed alpha
Helix 32
AD5
D
179 203Right-handed alpha
Helix 33
AD6
D
203 233Right-handed alpha
Helix 34
AD7
D
236 245Right-handed alpha
Helix 35
AD8
D
246 248Right-handed 310
Helix 36
AD9
D
249 257Right-handed alpha
Helix 37
AE1
F
6 22Right-handed alpha
Helix 38
AE2
F
23 26Right-handed 310
Helix 39
AE3
F
30 34Right-handed 310
Helix 40
AE4
F
35 54Right-handed alpha
Helix 41
AE5
F
55 60Right-handed alpha
Helix 42
AE6
F
61 66Right-handed alpha
Helix 43
AE7
F
66 72Right-handed alpha
Helix 44
AE8
F
79 92Right-handed alpha
Helix 45
AE9
F
108 120Right-handed alpha
Helix 46
AF1
F
123 174Right-handed alpha
Helix 47
AF2
F
184 202Right-handed alpha
Helix 48
AF3
F
202 234Right-handed alpha
Helix 49
AF4
F
236 245Right-handed alpha
Helix 50
AF5
F
249 255Right-handed alpha
Helix 51
AF6
G
9 22Right-handed alpha
Helix 52
AF7
G
35 54Right-handed alpha
Helix 53
AF8
G
64 69Right-handed alpha
Helix 54
AF9
G
77 90Right-handed alpha
Helix 55
AG1
G
110 116Right-handed alpha
Helix 56
AG2
G
125 171Right-handed alpha
Helix 57
AG3
G
181 234Right-handed alpha
Helix 58
AG4
G
238 246Right-handed alpha
Helix 59
AG5
G
249 259Right-handed alpha
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There are no sheets in PDB entry 6YSF
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