Analysis of interatomic Contacts of Structural Units in PDB entry:
6YSL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YSL entry

There are 7 chains in PDB entry 6YSL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
 LYS 3GLU 256
A
 VAL 14SER 39
B
 ASP 15SER 39
F
 LYS 3GLU 256
E
 ASP 2GLU 256
D
 ASP 2GLU 256
C
 ASP 2GLU 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 6YSL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
G
3 24Right-handed alpha
Helix 2
AA2
G
39 51Right-handed alpha
Helix 3
AA3
G
58 64Right-handed alpha
Helix 4
AA4
G
74 79Right-handed alpha
Helix 5
AA5
G
84 93Right-handed alpha
Helix 6
AA6
G
106 117Right-handed alpha
Helix 7
AA7
G
122 170Right-handed alpha
Helix 8
AA8
G
177 199Right-handed alpha
Helix 9
AA9
G
200 232Right-handed alpha
Helix 10
AB1
G
238 243Right-handed alpha
Helix 11
AB2
G
247 252Right-handed alpha
Helix 12
AB3
A
18 37Right-handed alpha
Helix 13
AB4
B
18 37Right-handed alpha
Helix 14
AB5
F
5 22Right-handed alpha
Helix 15
AB6
F
35 51Right-handed alpha
Helix 16
AB7
F
58 66Right-handed alpha
Helix 17
AB8
F
74 77Right-handed 310
Helix 18
AB9
F
78 92Right-handed alpha
Helix 19
AC1
F
96 100Right-handed 310
Helix 20
AC2
F
109 114Right-handed alpha
Helix 21
AC3
F
115 118Right-handed 310
Helix 22
AC4
F
124 171Right-handed alpha
Helix 23
AC5
F
179 196Right-handed alpha
Helix 24
AC6
F
200 232Right-handed alpha
Helix 25
AC7
F
236 240Right-handed 310
Helix 26
AC8
E
4 24Right-handed alpha
Helix 27
AC9
E
36 51Right-handed alpha
Helix 28
AD1
E
58 64Right-handed alpha
Helix 29
AD2
E
74 78Right-handed 310
Helix 30
AD3
E
84 89Right-handed alpha
Helix 31
AD4
E
97 102Right-handed alpha
Helix 32
AD5
E
109 119Right-handed alpha
Helix 33
AD6
E
123 172Right-handed alpha
Helix 34
AD7
E
177 199Right-handed alpha
Helix 35
AD8
E
200 230Right-handed alpha
Helix 36
AD9
E
234 242Right-handed alpha
Helix 37
AE1
E
243 246Right-handed 310
Helix 38
AE2
E
248 254Right-handed alpha
Helix 39
AE3
D
4 23Right-handed alpha
Helix 40
AE4
D
32 51Right-handed alpha
Helix 41
AE5
D
59 66Right-handed alpha
Helix 42
AE6
D
74 79Right-handed 310
Helix 43
AE7
D
84 91Right-handed alpha
Helix 44
AE8
D
108 118Right-handed alpha
Helix 45
AE9
D
125 170Right-handed alpha
Helix 46
AF1
D
181 199Right-handed alpha
Helix 47
AF2
D
200 230Right-handed alpha
Helix 48
AF3
D
235 242Right-handed alpha
Helix 49
AF4
D
243 245Right-handed 310
Helix 50
AF5
D
249 254Right-handed alpha
Helix 51
AF6
C
4 21Right-handed alpha
Helix 52
AF7
C
27 31Right-handed 310
Helix 53
AF8
C
34 51Right-handed alpha
Helix 54
AF9
C
55 57Right-handed 310
Helix 55
AG1
C
58 66Right-handed alpha
Helix 56
AG2
C
74 76Right-handed 310
Helix 57
AG3
C
77 82Right-handed alpha
Helix 58
AG4
C
84 92Right-handed alpha
Helix 59
AG5
C
96 101Right-handed 310
Helix 60
AG6
C
108 118Right-handed alpha
Helix 61
AG7
C
123 171Right-handed alpha
Helix 62
AG8
C
177 186Right-handed alpha
Helix 63
AG9
C
187 199Right-handed alpha
Helix 64
AH1
C
200 230Right-handed alpha
Helix 65
AH2
C
237 243Right-handed alpha
Helix 66
AH3
C
244 246Right-handed 310
Helix 67
AH4
C
247 252Right-handed alpha
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There are no sheets in PDB entry 6YSL
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