Analysis of interatomic Contacts of Structural Units in PDB entry:
6YT5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6YT5 entry

There are 12 chains in PDB entry 6YT5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 60	GLU 701
B	GLU 60	GLU 701
C	GLU 60	GLU 701
D	GLU 60	GLU 701
E	GLU 60	GLU 701
F	GLU 60	GLU 701
G	TYR 4	ARG 224
H	TYR 4	ARG 224
I	TYR 4	ARG 224
J	TYR 4	ARG 224
K	TYR 4	ARG 224
L	TYR 4	ARG 224

There are264 helices in PDB entry 6YT5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	61	78	Right-handed alpha
Helix 2	AA2	A	81	87	Right-handed alpha
Helix 3	AA3	A	97	127	Right-handed alpha
Helix 4	AA4	A	132	155	Right-handed alpha
Helix 5	AA5	A	162	167	Right-handed alpha
Helix 6	AA6	A	170	201	Right-handed alpha
Helix 7	AA7	A	202	205	Right-handed 310
Helix 8	AA8	A	216	231	Right-handed alpha
Helix 9	AA9	A	236	253	Right-handed alpha
Helix 10	AB1	A	256	265	Right-handed alpha
Helix 11	AB2	A	278	282	Right-handed alpha
Helix 12	AB3	A	283	297	Right-handed alpha
Helix 13	AB4	A	298	300	Right-handed 310
Helix 14	AB5	A	302	318	Right-handed alpha
Helix 15	AB6	A	321	337	Right-handed alpha
Helix 16	AB7	A	347	372	Right-handed alpha
Helix 17	AB8	A	378	396	Right-handed alpha
Helix 18	AB9	A	403	407	Right-handed 310
Helix 19	AC1	A	418	434	Right-handed alpha
Helix 20	AC2	A	442	452	Right-handed alpha
Helix 21	AC3	A	463	481	Right-handed alpha
Helix 22	AC4	A	487	500	Right-handed alpha
Helix 23	AC5	A	500	508	Right-handed alpha
Helix 24	AC6	A	510	523	Right-handed alpha
Helix 25	AC7	A	528	540	Right-handed alpha
Helix 26	AC8	A	542	558	Right-handed alpha
Helix 27	AC9	A	562	567	Right-handed alpha
Helix 28	AD1	A	569	587	Right-handed alpha
Helix 29	AD2	A	591	604	Right-handed alpha
Helix 30	AD3	A	631	633	Right-handed 310
Helix 31	AD4	A	634	651	Right-handed alpha
Helix 32	AD5	A	684	697	Right-handed alpha
Helix 33	AD6	B	61	78	Right-handed alpha
Helix 34	AD7	B	81	87	Right-handed alpha
Helix 35	AD8	B	97	127	Right-handed alpha
Helix 36	AD9	B	132	155	Right-handed alpha
Helix 37	AE1	B	162	167	Right-handed alpha
Helix 38	AE2	B	170	201	Right-handed alpha
Helix 39	AE3	B	202	205	Right-handed 310
Helix 40	AE4	B	216	231	Right-handed alpha
Helix 41	AE5	B	236	253	Right-handed alpha
Helix 42	AE6	B	256	265	Right-handed alpha
Helix 43	AE7	B	278	282	Right-handed alpha
Helix 44	AE8	B	283	297	Right-handed alpha
Helix 45	AE9	B	298	300	Right-handed 310
Helix 46	AF1	B	302	318	Right-handed alpha
Helix 47	AF2	B	321	337	Right-handed alpha
Helix 48	AF3	B	347	372	Right-handed alpha
Helix 49	AF4	B	378	396	Right-handed alpha
Helix 50	AF5	B	403	407	Right-handed 310
Helix 51	AF6	B	418	434	Right-handed alpha
Helix 52	AF7	B	442	452	Right-handed alpha
Helix 53	AF8	B	463	481	Right-handed alpha
Helix 54	AF9	B	487	500	Right-handed alpha
Helix 55	AG1	B	500	508	Right-handed alpha
Helix 56	AG2	B	510	523	Right-handed alpha
Helix 57	AG3	B	528	540	Right-handed alpha
Helix 58	AG4	B	542	558	Right-handed alpha
Helix 59	AG5	B	562	567	Right-handed alpha
Helix 60	AG6	B	569	587	Right-handed alpha
Helix 61	AG7	B	591	604	Right-handed alpha
Helix 62	AG8	B	631	633	Right-handed 310
Helix 63	AG9	B	634	651	Right-handed alpha
Helix 64	AH1	B	684	697	Right-handed alpha
Helix 65	AH2	C	61	78	Right-handed alpha
Helix 66	AH3	C	81	87	Right-handed alpha
Helix 67	AH4	C	97	127	Right-handed alpha
Helix 68	AH5	C	132	155	Right-handed alpha
Helix 69	AH6	C	162	167	Right-handed alpha
Helix 70	AH7	C	170	201	Right-handed alpha
Helix 71	AH8	C	202	205	Right-handed 310
Helix 72	AH9	C	216	231	Right-handed alpha
Helix 73	AI1	C	236	253	Right-handed alpha
Helix 74	AI2	C	256	265	Right-handed alpha
Helix 75	AI3	C	278	282	Right-handed alpha
Helix 76	AI4	C	283	297	Right-handed alpha
Helix 77	AI5	C	298	300	Right-handed 310
Helix 78	AI6	C	302	318	Right-handed alpha
Helix 79	AI7	C	321	337	Right-handed alpha
Helix 80	AI8	C	347	372	Right-handed alpha
Helix 81	AI9	C	378	396	Right-handed alpha
Helix 82	AJ1	C	403	407	Right-handed 310
Helix 83	AJ2	C	418	434	Right-handed alpha
Helix 84	AJ3	C	442	452	Right-handed alpha
Helix 85	AJ4	C	463	481	Right-handed alpha
Helix 86	AJ5	C	487	500	Right-handed alpha
Helix 87	AJ6	C	500	508	Right-handed alpha
Helix 88	AJ7	C	510	523	Right-handed alpha
Helix 89	AJ8	C	528	540	Right-handed alpha
Helix 90	AJ9	C	542	558	Right-handed alpha
Helix 91	AK1	C	562	567	Right-handed alpha
Helix 92	AK2	C	569	587	Right-handed alpha
Helix 93	AK3	C	591	604	Right-handed alpha
Helix 94	AK4	C	631	633	Right-handed 310
Helix 95	AK5	C	634	651	Right-handed alpha
Helix 96	AK6	C	684	697	Right-handed alpha
Helix 97	AK7	D	61	78	Right-handed alpha
Helix 98	AK8	D	81	87	Right-handed alpha
Helix 99	AK9	D	97	127	Right-handed alpha
Helix 100	AL1	D	132	155	Right-handed alpha
Helix 101	AL2	D	162	167	Right-handed alpha
Helix 102	AL3	D	170	201	Right-handed alpha
Helix 103	AL4	D	202	205	Right-handed 310
Helix 104	AL5	D	216	231	Right-handed alpha
Helix 105	AL6	D	236	253	Right-handed alpha
Helix 106	AL7	D	256	265	Right-handed alpha
Helix 107	AL8	D	278	282	Right-handed alpha
Helix 108	AL9	D	283	297	Right-handed alpha
Helix 109	AM1	D	298	300	Right-handed 310
Helix 110	AM2	D	302	318	Right-handed alpha
Helix 111	AM3	D	321	337	Right-handed alpha
Helix 112	AM4	D	347	372	Right-handed alpha
Helix 113	AM5	D	378	396	Right-handed alpha
Helix 114	AM6	D	403	407	Right-handed 310
Helix 115	AM7	D	418	434	Right-handed alpha
Helix 116	AM8	D	442	452	Right-handed alpha
Helix 117	AM9	D	463	481	Right-handed alpha
Helix 118	AN1	D	487	500	Right-handed alpha
Helix 119	AN2	D	500	508	Right-handed alpha
Helix 120	AN3	D	510	523	Right-handed alpha
Helix 121	AN4	D	528	540	Right-handed alpha
Helix 122	AN5	D	542	558	Right-handed alpha
Helix 123	AN6	D	562	567	Right-handed alpha
Helix 124	AN7	D	569	587	Right-handed alpha
Helix 125	AN8	D	591	604	Right-handed alpha
Helix 126	AN9	D	631	633	Right-handed 310
Helix 127	AO1	D	634	651	Right-handed alpha
Helix 128	AO2	D	684	697	Right-handed alpha
Helix 129	AO3	E	61	78	Right-handed alpha
Helix 130	AO4	E	81	87	Right-handed alpha
Helix 131	AO5	E	97	127	Right-handed alpha
Helix 132	AO6	E	132	155	Right-handed alpha
Helix 133	AO7	E	162	167	Right-handed alpha
Helix 134	AO8	E	170	201	Right-handed alpha
Helix 135	AO9	E	202	205	Right-handed 310
Helix 136	AP1	E	216	231	Right-handed alpha
Helix 137	AP2	E	236	253	Right-handed alpha
Helix 138	AP3	E	256	265	Right-handed alpha
Helix 139	AP4	E	278	282	Right-handed alpha
Helix 140	AP5	E	283	297	Right-handed alpha
Helix 141	AP6	E	298	300	Right-handed 310
Helix 142	AP7	E	302	318	Right-handed alpha
Helix 143	AP8	E	321	337	Right-handed alpha
Helix 144	AP9	E	347	372	Right-handed alpha
Helix 145	AQ1	E	378	396	Right-handed alpha
Helix 146	AQ2	E	403	407	Right-handed 310
Helix 147	AQ3	E	418	434	Right-handed alpha
Helix 148	AQ4	E	442	452	Right-handed alpha
Helix 149	AQ5	E	463	481	Right-handed alpha
Helix 150	AQ6	E	487	500	Right-handed alpha
Helix 151	AQ7	E	500	508	Right-handed alpha
Helix 152	AQ8	E	510	523	Right-handed alpha
Helix 153	AQ9	E	528	540	Right-handed alpha
Helix 154	AR1	E	542	558	Right-handed alpha
Helix 155	AR2	E	562	567	Right-handed alpha
Helix 156	AR3	E	569	587	Right-handed alpha
Helix 157	AR4	E	591	604	Right-handed alpha
Helix 158	AR5	E	631	633	Right-handed 310
Helix 159	AR6	E	634	651	Right-handed alpha
Helix 160	AR7	E	684	697	Right-handed alpha
Helix 161	AR8	F	61	78	Right-handed alpha
Helix 162	AR9	F	81	87	Right-handed alpha
Helix 163	AS1	F	97	127	Right-handed alpha
Helix 164	AS2	F	132	155	Right-handed alpha
Helix 165	AS3	F	162	167	Right-handed alpha
Helix 166	AS4	F	170	201	Right-handed alpha
Helix 167	AS5	F	202	205	Right-handed 310
Helix 168	AS6	F	216	231	Right-handed alpha
Helix 169	AS7	F	236	253	Right-handed alpha
Helix 170	AS8	F	256	265	Right-handed alpha
Helix 171	AS9	F	278	282	Right-handed alpha
Helix 172	AT1	F	283	297	Right-handed alpha
Helix 173	AT2	F	298	300	Right-handed 310
Helix 174	AT3	F	302	318	Right-handed alpha
Helix 175	AT4	F	321	337	Right-handed alpha
Helix 176	AT5	F	347	372	Right-handed alpha
Helix 177	AT6	F	378	396	Right-handed alpha
Helix 178	AT7	F	403	407	Right-handed 310
Helix 179	AT8	F	418	434	Right-handed alpha
Helix 180	AT9	F	442	452	Right-handed alpha
Helix 181	AU1	F	463	481	Right-handed alpha
Helix 182	AU2	F	487	500	Right-handed alpha
Helix 183	AU3	F	500	508	Right-handed alpha
Helix 184	AU4	F	510	523	Right-handed alpha
Helix 185	AU5	F	528	540	Right-handed alpha
Helix 186	AU6	F	542	558	Right-handed alpha
Helix 187	AU7	F	562	567	Right-handed alpha
Helix 188	AU8	F	569	587	Right-handed alpha
Helix 189	AU9	F	591	604	Right-handed alpha
Helix 190	AV1	F	631	633	Right-handed 310
Helix 191	AV2	F	634	651	Right-handed alpha
Helix 192	AV3	F	684	697	Right-handed alpha
Helix 193	AV4	G	11	21	Right-handed alpha
Helix 194	AV5	G	26	38	Right-handed alpha
Helix 195	AV6	G	58	66	Right-handed alpha
Helix 196	AV7	G	81	94	Right-handed alpha
Helix 197	AV8	G	100	110	Right-handed alpha
Helix 198	AV9	G	116	124	Right-handed alpha
Helix 199	AW1	G	127	131	Right-handed 310
Helix 200	AW2	G	134	143	Right-handed alpha
Helix 201	AW3	G	150	155	Right-handed alpha
Helix 202	AW4	G	168	173	Right-handed alpha
Helix 203	AW5	G	205	215	Right-handed alpha
Helix 204	AW6	G	217	223	Right-handed alpha
Helix 205	AW7	H	11	21	Right-handed alpha
Helix 206	AW8	H	26	38	Right-handed alpha
Helix 207	AW9	H	58	66	Right-handed alpha
Helix 208	AX1	H	81	94	Right-handed alpha
Helix 209	AX2	H	100	110	Right-handed alpha
Helix 210	AX3	H	116	124	Right-handed alpha
Helix 211	AX4	H	127	131	Right-handed 310
Helix 212	AX5	H	134	143	Right-handed alpha
Helix 213	AX6	H	150	155	Right-handed alpha
Helix 214	AX7	H	168	173	Right-handed alpha
Helix 215	AX8	H	205	215	Right-handed alpha
Helix 216	AX9	H	217	223	Right-handed alpha
Helix 217	AY1	I	11	21	Right-handed alpha
Helix 218	AY2	I	26	38	Right-handed alpha
Helix 219	AY3	I	58	66	Right-handed alpha
Helix 220	AY4	I	81	94	Right-handed alpha
Helix 221	AY5	I	100	110	Right-handed alpha
Helix 222	AY6	I	116	124	Right-handed alpha
Helix 223	AY7	I	127	131	Right-handed 310
Helix 224	AY8	I	134	143	Right-handed alpha
Helix 225	AY9	I	150	155	Right-handed alpha
Helix 226	AZ1	I	168	173	Right-handed alpha
Helix 227	AZ2	I	205	215	Right-handed alpha
Helix 228	AZ3	I	217	223	Right-handed alpha
Helix 229	AZ4	J	11	21	Right-handed alpha
Helix 230	AZ5	J	26	38	Right-handed alpha
Helix 231	AZ6	J	58	66	Right-handed alpha
Helix 232	AZ7	J	81	94	Right-handed alpha
Helix 233	AZ8	J	100	110	Right-handed alpha
Helix 234	AZ9	J	116	124	Right-handed alpha
Helix 235	BA1	J	127	131	Right-handed 310
Helix 236	BA2	J	134	143	Right-handed alpha
Helix 237	BA3	J	150	155	Right-handed alpha
Helix 238	BA4	J	168	173	Right-handed alpha
Helix 239	BA5	J	205	215	Right-handed alpha
Helix 240	BA6	J	217	223	Right-handed alpha
Helix 241	BA7	K	11	21	Right-handed alpha
Helix 242	BA8	K	26	38	Right-handed alpha
Helix 243	BA9	K	58	66	Right-handed alpha
Helix 244	BB1	K	81	94	Right-handed alpha
Helix 245	BB2	K	100	110	Right-handed alpha
Helix 246	BB3	K	116	124	Right-handed alpha
Helix 247	BB4	K	127	131	Right-handed 310
Helix 248	BB5	K	134	143	Right-handed alpha
Helix 249	BB6	K	150	155	Right-handed alpha
Helix 250	BB7	K	168	173	Right-handed alpha
Helix 251	BB8	K	205	215	Right-handed alpha
Helix 252	BB9	K	217	223	Right-handed alpha
Helix 253	BC1	L	11	21	Right-handed alpha
Helix 254	BC2	L	26	38	Right-handed alpha
Helix 255	BC3	L	58	66	Right-handed alpha
Helix 256	BC4	L	81	94	Right-handed alpha
Helix 257	BC5	L	100	110	Right-handed alpha
Helix 258	BC6	L	116	124	Right-handed alpha
Helix 259	BC7	L	127	131	Right-handed 310
Helix 260	BC8	L	134	143	Right-handed alpha
Helix 261	BC9	L	150	155	Right-handed alpha
Helix 262	BD1	L	168	173	Right-handed alpha
Helix 263	BD2	L	205	215	Right-handed alpha
Helix 264	BD3	L	217	223	Right-handed alpha

There are 18 sheets in PDB entry 6YT5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	271	first strand
Strand 2	A	274	277	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	605	607	first strand
Strand 2	A	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	670	671	first strand
Strand 2	A	682	683	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	271	first strand
Strand 2	B	274	277	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	605	607	first strand
Strand 2	B	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	670	671	first strand
Strand 2	B	682	683	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	268	271	first strand
Strand 2	C	274	277	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	605	607	first strand
Strand 2	C	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	670	671	first strand
Strand 2	C	682	683	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	268	271	first strand
Strand 2	D	274	277	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	605	607	first strand
Strand 2	D	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	670	671	first strand
Strand 2	D	682	683	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	268	271	first strand
Strand 2	E	274	277	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	605	607	first strand
Strand 2	E	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	670	671	first strand
Strand 2	E	682	683	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	268	271	first strand
Strand 2	F	274	277	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	605	607	first strand
Strand 2	F	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	670	671	first strand
Strand 2	F	682	683	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6YT5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6YT5