Analysis of interatomic Contacts of Structural Units in PDB entry:
6YXA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6YXA entry

There is 1 chain in PDB entry 6YXA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ASN 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6YXA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 18Right-handed alpha
Helix 2
AA2
A
21 39Right-handed alpha
Helix 3
AA3
A
51 64Right-handed alpha
Helix 4
AA4
A
67 76Right-handed alpha
Helix 5
AA5
A
86 94Right-handed alpha
Helix 6
AA6
A
95 110Right-handed alpha
Helix 7
AA7
A
116 132Right-handed alpha
Helix 8
AA8
A
135 151Right-handed alpha
Helix 9
AA9
A
156 170Right-handed alpha
Helix 10
AB1
A
170 178Right-handed alpha
Helix 11
AB2
A
180 196Right-handed alpha
Helix 12
AB3
A
196 230Right-handed alpha
Helix 13
AB4
A
231 233Right-handed 310
Helix 14
AB5
A
244 254Right-handed alpha
Helix 15
AB6
A
274 289Right-handed alpha
Helix 16
AB7
A
330 344Right-handed alpha
Helix 17
AB8
A
358 378Right-handed alpha
Helix 18
AB9
A
411 420Right-handed alpha
Helix 19
AC1
A
420 426Right-handed alpha
Helix 20
AC2
A
463 468Right-handed alpha
Helix 21
AC3
A
470 501Right-handed alpha
Helix 22
AC4
A
506 512Right-handed alpha
Helix 23
AC5
A
515 523Right-handed alpha
Helix 24
AC6
A
528 535Right-handed alpha
Helix 25
AC7
A
536 538Right-handed 310
Helix 26
AC8
A
541 546Right-handed alpha
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There are 3 sheets in PDB entry 6YXA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 240first strand
Strand 2
A
268 272anti-parallel
Strand 3
A
323 329parallel
Strand 4
A
311 315anti-parallel
Strand 5
A
291 298anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 397first strand
Strand 2
A
403 407anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 437first strand
Strand 2
A
427 432anti-parallel
Strand 3
A
449 453anti-parallel
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