Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z03 entry

There are 2 chains in PDB entry 6Z03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 2GLU 523
B
LYS 3GLU 523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 6Z03. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 48Right-handed alpha
Helix 2
AA2
A
52 55Right-handed 310
Helix 3
AA3
A
56 70Right-handed alpha
Helix 4
AA4
A
79 81Right-handed 310
Helix 5
AA5
A
85 100Right-handed alpha
Helix 6
AA6
A
101 124Right-handed alpha
Helix 7
AA7
A
163 166Right-handed 310
Helix 8
AA8
A
213 232Right-handed alpha
Helix 9
AA9
A
234 247Right-handed alpha
Helix 10
AB1
A
250 267Right-handed alpha
Helix 11
AB2
A
275 280Right-handed alpha
Helix 12
AB3
A
288 290Right-handed 310
Helix 13
AB4
A
306 308Right-handed 310
Helix 14
AB5
A
321 333Right-handed alpha
Helix 15
AB6
A
346 358Right-handed alpha
Helix 16
AB7
A
362 381Right-handed alpha
Helix 17
AB8
A
383 387Right-handed 310
Helix 18
AB9
A
389 408Right-handed alpha
Helix 19
AC1
A
417 439Right-handed alpha
Helix 20
AC2
A
441 465Right-handed alpha
Helix 21
AC3
A
470 477Right-handed alpha
Helix 22
AC4
A
479 491Right-handed alpha
Helix 23
AC5
A
493 498Right-handed 310
Helix 24
AC6
A
499 506Right-handed alpha
Helix 25
AC7
A
507 510Right-handed 310
Helix 26
AC8
A
514 523Right-handed alpha
Helix 27
AC9
B
35 48Right-handed alpha
Helix 28
AD1
B
52 55Right-handed 310
Helix 29
AD2
B
56 69Right-handed alpha
Helix 30
AD3
B
79 81Right-handed 310
Helix 31
AD4
B
85 100Right-handed alpha
Helix 32
AD5
B
101 111Right-handed alpha
Helix 33
AD6
B
114 124Right-handed alpha
Helix 34
AD7
B
163 166Right-handed 310
Helix 35
AD8
B
213 232Right-handed alpha
Helix 36
AD9
B
234 247Right-handed alpha
Helix 37
AE1
B
250 267Right-handed alpha
Helix 38
AE2
B
283 287Right-handed 310
Helix 39
AE3
B
288 290Right-handed 310
Helix 40
AE4
B
318 320Right-handed 310
Helix 41
AE5
B
321 333Right-handed alpha
Helix 42
AE6
B
346 356Right-handed alpha
Helix 43
AE7
B
362 381Right-handed alpha
Helix 44
AE8
B
383 387Right-handed 310
Helix 45
AE9
B
389 408Right-handed alpha
Helix 46
AF1
B
417 438Right-handed alpha
Helix 47
AF2
B
441 465Right-handed alpha
Helix 48
AF3
B
470 477Right-handed alpha
Helix 49
AF4
B
479 491Right-handed alpha
Helix 50
AF5
B
493 498Right-handed 310
Helix 51
AF6
B
499 506Right-handed alpha
Helix 52
AF7
B
507 511Right-handed 310
Helix 53
AF8
B
514 523Right-handed alpha
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There are 10 sheets in PDB entry 6Z03. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 8first strand
Strand 2
A
125 128anti-parallel
Strand 3
A
131 134anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
30 33first strand
Strand 2
A
24 27anti-parallel
Strand 3
A
83 84anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
144 145first strand
Strand 2
A
158 159anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
184 186first strand
Strand 2
A
168 170parallel
Strand 3
A
195 198anti-parallel
Strand 4
A
205 208anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
292 294first strand
Strand 2
A
298 304anti-parallel
Strand 3
A
310 316anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
7 9first strand
Strand 2
B
125 128anti-parallel
Strand 3
B
131 134anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
30 33first strand
Strand 2
B
24 27anti-parallel
Strand 3
B
83 84anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
144 145first strand
Strand 2
B
158 159anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
184 186first strand
Strand 2
B
168 170parallel
Strand 3
B
195 198anti-parallel
Strand 4
B
205 208anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
292 294first strand
Strand 2
B
298 304anti-parallel
Strand 3
B
310 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il