Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z0J entry

There is 1 chain in PDB entry 6Z0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6Z0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 16Right-handed 310
Helix 2
AA2
A
151 158Right-handed alpha
Helix 3
AA3
A
168 174Right-handed alpha
Helix 4
AA4
A
200 205Right-handed alpha
Helix 5
AA5
A
289 291Right-handed 310
Helix 6
AA6
A
347 351Right-handed 310
Helix 7
AA7
A
445 452Right-handed alpha
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There are 7 sheets in PDB entry 6Z0J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
223 227parallel
Strand 3
A
304 311parallel
Strand 4
A
296 301anti-parallel
Strand 5
A
245 249anti-parallel
Strand 6
A
274 276anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
47 59anti-parallel
Strand 3
A
67 72anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
47 59anti-parallel
Strand 3
A
88 95parallel
Strand 4
A
127 134anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
162 167parallel
Strand 3
A
140 145anti-parallel
Strand 4
A
104 106anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
184 192anti-parallel
Strand 3
A
231 238parallel
Strand 4
A
281 287anti-parallel
Strand 5
A
255 260anti-parallel
Strand 6
A
263 271anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
339 345anti-parallel
Strand 3
A
373 379parallel
Strand 4
A
425 431anti-parallel
Strand 5
A
399 403anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 368first strand
Strand 2
A
454 460parallel
Strand 3
A
437 443anti-parallel
Strand 4
A
389 393anti-parallel
Strand 5
A
418 421anti-parallel
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