Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z0P entry

There are 2 chains in PDB entry 6Z0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 477PRO 723
B
 GLN 476PRO 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6Z0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
480 489Right-handed alpha
Helix 2
AA2
A
499 512Right-handed alpha
Helix 3
AA3
A
519 524Right-handed alpha
Helix 4
AA4
A
527 547Right-handed alpha
Helix 5
AA5
A
562 577Right-handed alpha
Helix 6
AA6
A
592 597Right-handed 310
Helix 7
AA7
A
604 610Right-handed alpha
Helix 8
AA8
A
614 619Right-handed alpha
Helix 9
AA9
A
638 644Right-handed alpha
Helix 10
AB1
A
646 656Right-handed alpha
Helix 11
AB2
A
671 682Right-handed alpha
Helix 12
AB3
A
695 709Right-handed alpha
Helix 13
AB4
B
480 489Right-handed alpha
Helix 14
AB5
B
499 512Right-handed alpha
Helix 15
AB6
B
519 524Right-handed alpha
Helix 16
AB7
B
527 547Right-handed alpha
Helix 17
AB8
B
562 578Right-handed alpha
Helix 18
AB9
B
592 597Right-handed 310
Helix 19
AC1
B
604 610Right-handed alpha
Helix 20
AC2
B
614 619Right-handed alpha
Helix 21
AC3
B
638 644Right-handed alpha
Helix 22
AC4
B
646 659Right-handed alpha
Helix 23
AC5
B
671 682Right-handed alpha
Helix 24
AC6
B
695 709Right-handed alpha
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There are 2 sheets in PDB entry 6Z0P. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 497first strand
Strand 2
A
713 721parallel
Strand 3
A
684 690parallel
Strand 4
A
551 555parallel
Strand 5
A
661 665parallel
Strand 6
A
581 585parallel
Strand 7
A
627 630parallel
Strand 8
A
620 621anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 497first strand
Strand 2
B
713 721parallel
Strand 3
B
684 690parallel
Strand 4
B
551 555parallel
Strand 5
B
661 665parallel
Strand 6
B
581 585parallel
Strand 7
B
627 630parallel
Strand 8
B
620 621anti-parallel
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