Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z0W entry

There are 4 chains in PDB entry 6Z0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 252HIS 382
B
 LEU 251LYS 375
C
 ALA 252HIS 381
D
 ALA 252LEU 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6Z0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
253 258Right-handed alpha
Helix 2
AA2
A
259 263Right-handed 310
Helix 3
AA3
A
295 308Right-handed alpha
Helix 4
AA4
A
315 326Right-handed alpha
Helix 5
AA5
A
333 335Right-handed 310
Helix 6
AA6
A
336 349Right-handed alpha
Helix 7
AA7
A
371 375Right-handed 310
Helix 8
AA8
B
252 258Right-handed alpha
Helix 9
AA9
B
259 263Right-handed 310
Helix 10
AB1
B
295 308Right-handed alpha
Helix 11
AB2
B
315 326Right-handed alpha
Helix 12
AB3
B
333 335Right-handed 310
Helix 13
AB4
B
336 349Right-handed alpha
Helix 14
AB5
B
371 375Right-handed 310
Helix 15
AB6
C
253 260Right-handed alpha
Helix 16
AB7
C
261 263Right-handed 310
Helix 17
AB8
C
295 308Right-handed alpha
Helix 18
AB9
C
315 326Right-handed alpha
Helix 19
AC1
C
333 335Right-handed 310
Helix 20
AC2
C
336 355Right-handed alpha
Helix 21
AC3
C
371 375Right-handed 310
Helix 22
AC4
D
254 263Right-handed 310
Helix 23
AC5
D
295 308Right-handed alpha
Helix 24
AC6
D
315 326Right-handed alpha
Helix 25
AC7
D
333 335Right-handed 310
Helix 26
AC8
D
336 355Right-handed alpha
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There are 4 sheets in PDB entry 6Z0W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 294first strand
Strand 2
A
273 278anti-parallel
Strand 3
A
265 269anti-parallel
Strand 4
A
312 314parallel
Strand 5
A
362 363parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 294first strand
Strand 2
B
273 278anti-parallel
Strand 3
B
265 269anti-parallel
Strand 4
B
312 314parallel
Strand 5
B
362 363parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 294first strand
Strand 2
C
273 278anti-parallel
Strand 3
C
265 269anti-parallel
Strand 4
C
312 314parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
288 294first strand
Strand 2
D
273 278anti-parallel
Strand 3
D
265 268anti-parallel
Strand 4
D
312 314parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il