Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z11

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z11 entry

There are 6 chains in PDB entry 6Z11 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 224
B	MET 1	GLY 235
C	ASN 21	SER 1130
D	VAL 4	ALA 1283
E	ALA 25	GLY 106
H	GLY 3	LYS 503

There are 95 helices in PDB entry 6Z11. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	45	Right-handed alpha
Helix 2	AA2	A	72	81	Right-handed alpha
Helix 3	AA3	A	151	156	Right-handed alpha
Helix 4	AA4	A	203	224	Right-handed alpha
Helix 5	AA5	B	34	45	Right-handed alpha
Helix 6	AA6	B	72	82	Right-handed alpha
Helix 7	AA7	B	203	224	Right-handed alpha
Helix 8	AA8	C	45	56	Right-handed alpha
Helix 9	AA9	C	58	68	Right-handed alpha
Helix 10	AB1	C	76	85	Right-handed alpha
Helix 11	AB2	C	109	115	Right-handed alpha
Helix 12	AB3	C	225	232	Right-handed alpha
Helix 13	AB4	C	235	243	Right-handed alpha
Helix 14	AB5	C	246	254	Right-handed alpha
Helix 15	AB6	C	263	273	Right-handed alpha
Helix 16	AB7	C	279	291	Right-handed alpha
Helix 17	AB8	C	300	310	Right-handed alpha
Helix 18	AB9	C	330	342	Right-handed alpha
Helix 19	AC1	C	371	396	Right-handed alpha
Helix 20	AC2	C	404	408	Right-handed 310
Helix 21	AC3	C	411	424	Right-handed alpha
Helix 22	AC4	C	435	443	Right-handed alpha
Helix 23	AC5	C	523	527	Right-handed 310
Helix 24	AC6	C	587	591	Right-handed 310
Helix 25	AC7	C	592	604	Right-handed alpha
Helix 26	AC8	C	623	628	Right-handed alpha
Helix 27	AC9	C	721	725	Right-handed 310
Helix 28	AD1	C	730	735	Right-handed alpha
Helix 29	AD2	C	768	773	Right-handed alpha
Helix 30	AD3	C	891	895	Right-handed 310
Helix 31	AD4	C	909	913	Right-handed 310
Helix 32	AD5	C	919	933	Right-handed alpha
Helix 33	AD6	C	944	948	Right-handed 310
Helix 34	AD7	C	1027	1031	Right-handed 310
Helix 35	AD8	C	1050	1054	Right-handed 310
Helix 36	AD9	C	1060	1069	Right-handed alpha
Helix 37	AE1	C	1073	1082	Right-handed alpha
Helix 38	AE2	C	1088	1100	Right-handed alpha
Helix 39	AE3	C	1109	1120	Right-handed alpha
Helix 40	AE4	C	1121	1123	Right-handed 310
Helix 41	AE5	D	16	24	Right-handed alpha
Helix 42	AE6	D	36	40	Right-handed 310
Helix 43	AE7	D	103	108	Right-handed alpha
Helix 44	AE8	D	113	117	Right-handed 310
Helix 45	AE9	D	123	130	Right-handed alpha
Helix 46	AF1	D	141	185	Right-handed alpha
Helix 47	AF2	D	190	228	Right-handed alpha
Helix 48	AF3	D	238	247	Right-handed alpha
Helix 49	AF4	D	260	268	Right-handed alpha
Helix 50	AF5	D	271	283	Right-handed alpha
Helix 51	AF6	D	288	302	Right-handed alpha
Helix 52	AF7	D	321	325	Right-handed 310
Helix 53	AF8	D	341	356	Right-handed alpha
Helix 54	AF9	D	363	382	Right-handed alpha
Helix 55	AG1	D	445	452	Right-handed alpha
Helix 56	AG2	D	452	462	Right-handed alpha
Helix 57	AG3	D	469	478	Right-handed alpha
Helix 58	AG4	D	482	491	Right-handed alpha
Helix 59	AG5	D	505	507	Right-handed 310
Helix 60	AG6	D	548	558	Right-handed alpha
Helix 61	AG7	D	579	590	Right-handed alpha
Helix 62	AG8	D	614	625	Right-handed alpha
Helix 63	AG9	D	666	674	Right-handed alpha
Helix 64	AH1	D	688	703	Right-handed alpha
Helix 65	AH2	D	704	724	Right-handed alpha
Helix 66	AH3	D	740	761	Right-handed alpha
Helix 67	AH4	D	765	792	Right-handed alpha
Helix 68	AH5	D	796	804	Right-handed alpha
Helix 69	AH6	D	809	818	Right-handed alpha
Helix 70	AH7	D	851	880	Right-handed alpha
Helix 71	AH8	D	914	919	Right-handed alpha
Helix 72	AH9	D	944	954	Right-handed alpha
Helix 73	AI1	D	995	1004	Right-handed alpha
Helix 74	AI2	D	1005	1009	Right-handed 310
Helix 75	AI3	D	1028	1036	Right-handed alpha
Helix 76	AI4	D	1118	1126	Right-handed alpha
Helix 77	AI5	D	1130	1145	Right-handed alpha
Helix 78	AI6	D	1155	1160	Right-handed alpha
Helix 79	AI7	D	1161	1163	Right-handed 310
Helix 80	AI8	D	1184	1190	Right-handed alpha
Helix 81	AI9	D	1210	1217	Right-handed alpha
Helix 82	AJ1	D	1220	1225	Right-handed alpha
Helix 83	AJ2	D	1229	1240	Right-handed alpha
Helix 84	AJ3	D	1265	1270	Right-handed alpha
Helix 85	AJ4	E	30	34	Right-handed 310
Helix 86	AJ5	E	36	43	Right-handed alpha
Helix 87	AJ6	E	46	67	Right-handed alpha
Helix 88	AJ7	E	87	98	Right-handed alpha
Helix 89	AJ8	H	4	41	Right-handed alpha
Helix 90	AJ9	H	45	65	Right-handed alpha
Helix 91	AK1	H	106	110	Right-handed 310
Helix 92	AK2	H	454	474	Right-handed alpha
Helix 93	AK3	H	476	480	Right-handed 310
Helix 94	AK4	H	488	492	Right-handed 310
Helix 95	AK5	H	494	501	Right-handed alpha

There are 41 sheets in PDB entry 6Z11. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	26	first strand
Strand 2	A	190	198	anti-parallel
Strand 3	A	171	179	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	93	100	anti-parallel
Strand 3	A	133	147	anti-parallel
Strand 4	A	47	56	anti-parallel
Strand 5	A	162	163	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	93	100	anti-parallel
Strand 3	A	133	147	anti-parallel
Strand 4	A	166	168	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	87	first strand
Strand 2	A	116	118	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	106	first strand
Strand 2	A	124	128	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	12	first strand
Strand 2	B	20	26	anti-parallel
Strand 3	B	187	197	anti-parallel
Strand 4	B	173	182	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	94	98	anti-parallel
Strand 3	B	135	143	anti-parallel
Strand 4	B	48	56	anti-parallel
Strand 5	B	162	163	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	87	first strand
Strand 2	B	116	118	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	106	first strand
Strand 2	B	124	127	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	166	167	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	88	first strand
Strand 2	C	94	97	anti-parallel
Strand 3	C	128	132	anti-parallel
Strand 4	C	137	141	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	102	103	first strand
Strand 2	C	121	125	anti-parallel
Strand 3	C	144	149	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	159	first strand
Strand 2	C	162	166	anti-parallel
Strand 3	C	428	430	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	172	first strand
Strand 2	C	367	369	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	182	first strand
Strand 2	C	189	190	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	205	first strand
Strand 2	C	214	217	anti-parallel
Strand 3	C	222	224	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	347	first strand
Strand 2	C	353	354	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	497	first strand
Strand 2	C	503	511	anti-parallel
Strand 3	C	514	522	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	497	first strand
Strand 2	C	503	511	anti-parallel
Strand 3	C	569	570	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	532	533	first strand
Strand 2	C	549	553	anti-parallel
Strand 3	C	560	563	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	617	618	first strand
Strand 2	C	963	964	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	633	634	first strand
Strand 2	C	692	694	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	639	643	first strand
Strand 2	C	648	653	anti-parallel
Strand 3	C	660	662	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	699	700	first strand
Strand 2	C	703	704	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	883	885	first strand
Strand 2	C	875	877	anti-parallel
Strand 3	C	1014	1023	anti-parallel
Strand 4	C	707	714	anti-parallel
Strand 5	C	906	908	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	883	885	first strand
Strand 2	C	875	877	anti-parallel
Strand 3	C	1014	1023	anti-parallel
Strand 4	C	998	999	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	740	750	first strand
Strand 2	C	858	868	anti-parallel
Strand 3	C	835	845	anti-parallel
Strand 4	C	786	788	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	759	760	first strand
Strand 2	C	796	798	anti-parallel
Strand 3	C	824	825	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	792	794	first strand
Strand 2	C	828	829	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1033	1035	first strand
Strand 2	D	425	429	anti-parallel
Strand 3	D	540	544	anti-parallel
Strand 4	D	496	499	anti-parallel
Strand 5	D	509	517	anti-parallel
Strand 6	D	440	444	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1127	1128	first strand
Strand 2	D	10	11	anti-parallel
Strand 3	D	1243	1244	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	102	first strand
Strand 2	D	313	319	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	328	330	first strand
Strand 2	D	334	336	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	611	612	first strand
Strand 2	D	633	637	parallel
Strand 3	D	661	665	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	896	898	first strand
Strand 2	D	959	961	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	901	903	first strand
Strand 2	D	909	911	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1076	1077	first strand
Strand 2	D	1062	1068	anti-parallel
Strand 3	D	1081	1082	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1076	1077	first strand
Strand 2	D	1062	1068	anti-parallel
Strand 3	D	1052	1058	anti-parallel
Strand 4	D	1105	1106	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1182	1183	first strand
Strand 2	D	1165	1167	anti-parallel
Strand 3	D	1205	1206	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1272	1275	first strand
Strand 2	E	101	104	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	98	103	first strand
Strand 2	H	85	92	anti-parallel
Strand 3	H	71	74	anti-parallel
Strand 4	H	127	128	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z11

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z11