Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z16

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z16 entry

There are 14 chains in PDB entry 6Z16 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 29	ALA 816
B	ARG 3	ASP 140
C	MET 1	LYS 107
D	MET 1	LYS 489
E	MET 1	LYS 158
F	MET 2	ASN 89
G	ILE 8	ASP 111
a	PRO 29	ALA 816
b	ARG 3	ASP 140
c	MET 1	LYS 107
d	MET 1	LYS 489
e	MET 1	LYS 158
f	MET 2	ASN 89
g	ILE 8	ASP 111

There are162 helices in PDB entry 6Z16. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	36	Right-handed alpha
Helix 2	AA2	A	36	52	Right-handed alpha
Helix 3	AA3	A	56	62	Right-handed alpha
Helix 4	AA4	A	62	73	Right-handed alpha
Helix 5	AA5	A	75	81	Right-handed alpha
Helix 6	AA6	A	104	129	Right-handed alpha
Helix 7	AA7	A	135	156	Right-handed alpha
Helix 8	AA8	A	158	178	Right-handed alpha
Helix 9	AA9	A	183	215	Right-handed alpha
Helix 10	AB1	A	219	224	Right-handed alpha
Helix 11	AB2	A	233	249	Right-handed alpha
Helix 12	AB3	A	253	258	Right-handed 310
Helix 13	AB4	A	260	264	Right-handed 310
Helix 14	AB5	A	265	273	Right-handed alpha
Helix 15	AB6	A	276	278	Right-handed 310
Helix 16	AB7	A	279	293	Right-handed alpha
Helix 17	AB8	A	295	317	Right-handed alpha
Helix 18	AB9	A	322	348	Right-handed alpha
Helix 19	AC1	A	352	356	Right-handed 310
Helix 20	AC2	A	359	392	Right-handed alpha
Helix 21	AC3	A	406	422	Right-handed alpha
Helix 22	AC4	A	427	441	Right-handed alpha
Helix 23	AC5	A	447	449	Right-handed 310
Helix 24	AC6	A	450	473	Right-handed alpha
Helix 25	AC7	A	492	512	Right-handed alpha
Helix 26	AC8	A	513	520	Right-handed alpha
Helix 27	AC9	A	520	529	Right-handed alpha
Helix 28	AD1	A	536	544	Right-handed alpha
Helix 29	AD2	A	551	568	Right-handed alpha
Helix 30	AD3	A	573	584	Right-handed alpha
Helix 31	AD4	A	586	609	Right-handed alpha
Helix 32	AD5	A	612	635	Right-handed alpha
Helix 33	AD6	A	649	668	Right-handed alpha
Helix 34	AD7	A	671	693	Right-handed alpha
Helix 35	AD8	A	695	718	Right-handed alpha
Helix 36	AD9	A	733	756	Right-handed alpha
Helix 37	AE1	A	764	770	Right-handed alpha
Helix 38	AE2	A	780	787	Right-handed alpha
Helix 39	AE3	A	792	813	Right-handed alpha
Helix 40	AE4	B	5	29	Right-handed alpha
Helix 41	AE5	B	36	55	Right-handed alpha
Helix 42	AE6	B	57	64	Right-handed alpha
Helix 43	AE7	B	67	89	Right-handed alpha
Helix 44	AE8	B	113	138	Right-handed alpha
Helix 45	AE9	C	2	21	Right-handed alpha
Helix 46	AF1	C	24	48	Right-handed alpha
Helix 47	AF2	C	66	98	Right-handed alpha
Helix 48	AF3	D	1	5	Right-handed 310
Helix 49	AF4	D	6	19	Right-handed alpha
Helix 50	AF5	D	25	54	Right-handed alpha
Helix 51	AF6	D	75	100	Right-handed alpha
Helix 52	AF7	D	101	107	Right-handed alpha
Helix 53	AF8	D	108	125	Right-handed alpha
Helix 54	AF9	D	128	149	Right-handed alpha
Helix 55	AG1	D	152	184	Right-handed alpha
Helix 56	AG2	D	188	199	Right-handed alpha
Helix 57	AG3	D	202	220	Right-handed alpha
Helix 58	AG4	D	228	235	Right-handed alpha
Helix 59	AG5	D	237	248	Right-handed alpha
Helix 60	AG6	D	248	263	Right-handed alpha
Helix 61	AG7	D	267	293	Right-handed alpha
Helix 62	AG8	D	295	316	Right-handed alpha
Helix 63	AG9	D	319	352	Right-handed alpha
Helix 64	AH1	D	355	359	Right-handed 310
Helix 65	AH2	D	366	382	Right-handed alpha
Helix 66	AH3	D	386	388	Right-handed 310
Helix 67	AH4	D	389	402	Right-handed alpha
Helix 68	AH5	D	404	430	Right-handed alpha
Helix 69	AH6	D	445	462	Right-handed alpha
Helix 70	AH7	D	462	478	Right-handed alpha
Helix 71	AH8	D	480	488	Right-handed alpha
Helix 72	AH9	E	2	19	Right-handed alpha
Helix 73	AI1	E	23	41	Right-handed alpha
Helix 74	AI2	E	50	80	Right-handed alpha
Helix 75	AI3	E	99	112	Right-handed alpha
Helix 76	AI4	E	140	157	Right-handed alpha
Helix 77	AI5	F	3	23	Right-handed alpha
Helix 78	AI6	F	26	53	Right-handed alpha
Helix 79	AI7	F	57	80	Right-handed alpha
Helix 80	AI8	G	10	34	Right-handed alpha
Helix 81	AI9	G	36	67	Right-handed alpha
Helix 82	AJ1	G	71	99	Right-handed alpha
Helix 83	AJ2	a	31	36	Right-handed alpha
Helix 84	AJ3	a	36	52	Right-handed alpha
Helix 85	AJ4	a	56	62	Right-handed alpha
Helix 86	AJ5	a	62	73	Right-handed alpha
Helix 87	AJ6	a	75	81	Right-handed alpha
Helix 88	AJ7	a	104	129	Right-handed alpha
Helix 89	AJ8	a	135	156	Right-handed alpha
Helix 90	AJ9	a	158	178	Right-handed alpha
Helix 91	AK1	a	183	215	Right-handed alpha
Helix 92	AK2	a	219	224	Right-handed alpha
Helix 93	AK3	a	233	249	Right-handed alpha
Helix 94	AK4	a	253	257	Right-handed 310
Helix 95	AK5	a	260	264	Right-handed 310
Helix 96	AK6	a	265	273	Right-handed alpha
Helix 97	AK7	a	279	293	Right-handed alpha
Helix 98	AK8	a	295	317	Right-handed alpha
Helix 99	AK9	a	322	348	Right-handed alpha
Helix 100	AL1	a	352	356	Right-handed 310
Helix 101	AL2	a	359	392	Right-handed alpha
Helix 102	AL3	a	406	422	Right-handed alpha
Helix 103	AL4	a	427	441	Right-handed alpha
Helix 104	AL5	a	447	449	Right-handed 310
Helix 105	AL6	a	450	473	Right-handed alpha
Helix 106	AL7	a	492	512	Right-handed alpha
Helix 107	AL8	a	513	520	Right-handed alpha
Helix 108	AL9	a	520	529	Right-handed alpha
Helix 109	AM1	a	536	544	Right-handed alpha
Helix 110	AM2	a	551	568	Right-handed alpha
Helix 111	AM3	a	573	584	Right-handed alpha
Helix 112	AM4	a	586	609	Right-handed alpha
Helix 113	AM5	a	612	635	Right-handed alpha
Helix 114	AM6	a	649	668	Right-handed alpha
Helix 115	AM7	a	671	693	Right-handed alpha
Helix 116	AM8	a	695	718	Right-handed alpha
Helix 117	AM9	a	733	756	Right-handed alpha
Helix 118	AN1	a	764	770	Right-handed alpha
Helix 119	AN2	a	780	787	Right-handed alpha
Helix 120	AN3	a	790	813	Right-handed alpha
Helix 121	AN4	b	5	29	Right-handed alpha
Helix 122	AN5	b	36	55	Right-handed alpha
Helix 123	AN6	b	57	64	Right-handed alpha
Helix 124	AN7	b	67	89	Right-handed alpha
Helix 125	AN8	b	113	138	Right-handed alpha
Helix 126	AN9	c	2	21	Right-handed alpha
Helix 127	AO1	c	24	48	Right-handed alpha
Helix 128	AO2	c	66	98	Right-handed alpha
Helix 129	AO3	d	1	5	Right-handed 310
Helix 130	AO4	d	6	19	Right-handed alpha
Helix 131	AO5	d	25	54	Right-handed alpha
Helix 132	AO6	d	75	100	Right-handed alpha
Helix 133	AO7	d	101	107	Right-handed alpha
Helix 134	AO8	d	108	125	Right-handed alpha
Helix 135	AO9	d	128	149	Right-handed alpha
Helix 136	AP1	d	152	184	Right-handed alpha
Helix 137	AP2	d	188	199	Right-handed alpha
Helix 138	AP3	d	202	220	Right-handed alpha
Helix 139	AP4	d	228	235	Right-handed alpha
Helix 140	AP5	d	237	263	Right-handed alpha
Helix 141	AP6	d	267	293	Right-handed alpha
Helix 142	AP7	d	295	316	Right-handed alpha
Helix 143	AP8	d	319	352	Right-handed alpha
Helix 144	AP9	d	355	359	Right-handed 310
Helix 145	AQ1	d	366	382	Right-handed alpha
Helix 146	AQ2	d	386	388	Right-handed 310
Helix 147	AQ3	d	389	402	Right-handed alpha
Helix 148	AQ4	d	404	430	Right-handed alpha
Helix 149	AQ5	d	445	462	Right-handed alpha
Helix 150	AQ6	d	462	478	Right-handed alpha
Helix 151	AQ7	d	480	488	Right-handed alpha
Helix 152	AQ8	e	2	19	Right-handed alpha
Helix 153	AQ9	e	23	41	Right-handed alpha
Helix 154	AR1	e	50	80	Right-handed alpha
Helix 155	AR2	e	99	112	Right-handed alpha
Helix 156	AR3	e	140	157	Right-handed alpha
Helix 157	AR4	f	3	23	Right-handed alpha
Helix 158	AR5	f	26	53	Right-handed alpha
Helix 159	AR6	f	57	80	Right-handed alpha
Helix 160	AR7	g	10	34	Right-handed alpha
Helix 161	AR8	g	36	67	Right-handed alpha
Helix 162	AR9	g	71	99	Right-handed alpha

There are 8 sheets in PDB entry 6Z16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	92	first strand
Strand 2	A	97	103	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	101	first strand
Strand 2	B	109	112	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	60	first strand
Strand 2	D	71	74	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	89	94	first strand
Strand 2	E	127	132	anti-parallel
Strand 3	E	116	121	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	85	92	first strand
Strand 2	a	97	103	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	98	101	first strand
Strand 2	b	109	112	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	57	60	first strand
Strand 2	d	71	74	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	89	94	first strand
Strand 2	e	127	132	anti-parallel
Strand 3	e	116	121	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z16

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z16