Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z1G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z1G entry

There are 5 chains in PDB entry 6Z1G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 326	ASN 411
B	THR 24	GLU 465
C	THR 24	GLU 465
D	MET 1	PRO 106
E	MET 1	PRO 106

There are 44 helices in PDB entry 6Z1G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	327	339	Right-handed alpha
Helix 2	AA2	A	352	357	Right-handed 310
Helix 3	AA3	A	369	384	Right-handed alpha
Helix 4	AA4	B	52	62	Right-handed alpha
Helix 5	AA5	B	70	75	Right-handed 310
Helix 6	AA6	B	77	82	Right-handed alpha
Helix 7	AA7	B	113	122	Right-handed alpha
Helix 8	AA8	B	142	147	Right-handed alpha
Helix 9	AA9	B	155	164	Right-handed alpha
Helix 10	AB1	B	182	197	Right-handed alpha
Helix 11	AB2	B	214	234	Right-handed alpha
Helix 12	AB3	B	247	261	Right-handed alpha
Helix 13	AB4	B	270	274	Right-handed alpha
Helix 14	AB5	B	274	289	Right-handed alpha
Helix 15	AB6	B	311	323	Right-handed alpha
Helix 16	AB7	B	342	352	Right-handed alpha
Helix 17	AB8	B	387	396	Right-handed alpha
Helix 18	AB9	B	404	409	Right-handed alpha
Helix 19	AC1	B	413	435	Right-handed alpha
Helix 20	AC2	B	441	450	Right-handed alpha
Helix 21	AC3	B	453	463	Right-handed alpha
Helix 22	AC4	C	52	62	Right-handed alpha
Helix 23	AC5	C	70	75	Right-handed 310
Helix 24	AC6	C	77	82	Right-handed alpha
Helix 25	AC7	C	107	109	Right-handed 310
Helix 26	AC8	C	113	122	Right-handed alpha
Helix 27	AC9	C	142	147	Right-handed alpha
Helix 28	AD1	C	155	164	Right-handed alpha
Helix 29	AD2	C	182	197	Right-handed alpha
Helix 30	AD3	C	214	234	Right-handed alpha
Helix 31	AD4	C	247	261	Right-handed alpha
Helix 32	AD5	C	270	274	Right-handed alpha
Helix 33	AD6	C	274	289	Right-handed alpha
Helix 34	AD7	C	311	323	Right-handed alpha
Helix 35	AD8	C	342	352	Right-handed alpha
Helix 36	AD9	C	387	396	Right-handed alpha
Helix 37	AE1	C	404	409	Right-handed alpha
Helix 38	AE2	C	413	435	Right-handed alpha
Helix 39	AE3	C	441	450	Right-handed alpha
Helix 40	AE4	C	453	463	Right-handed alpha
Helix 41	AE5	D	20	35	Right-handed alpha
Helix 42	AE6	D	66	80	Right-handed alpha
Helix 43	AE7	E	20	35	Right-handed alpha
Helix 44	AE8	E	66	80	Right-handed alpha

There are 12 sheets in PDB entry 6Z1G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	361	first strand
Strand 2	A	343	349	anti-parallel
Strand 3	A	388	395	anti-parallel
Strand 4	A	400	408	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	90	first strand
Strand 2	B	98	105	anti-parallel
Strand 3	B	36	45	anti-parallel
Strand 4	B	131	140	anti-parallel
Strand 5	B	309	310	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	173	first strand
Strand 2	B	399	403	parallel
Strand 3	B	376	380	parallel
Strand 4	B	326	328	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	202	first strand
Strand 2	B	238	240	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	269	first strand
Strand 2	B	291	295	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	355	first strand
Strand 2	B	367	368	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	90	first strand
Strand 2	C	98	105	anti-parallel
Strand 3	C	36	45	anti-parallel
Strand 4	C	131	140	anti-parallel
Strand 5	C	309	310	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	173	first strand
Strand 2	C	399	403	parallel
Strand 3	C	376	380	parallel
Strand 4	C	326	328	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	269	first strand
Strand 2	C	291	295	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	367	368	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	56	first strand
Strand 2	D	37	43	anti-parallel
Strand 3	D	84	91	anti-parallel
Strand 4	D	96	104	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	56	first strand
Strand 2	E	37	43	anti-parallel
Strand 3	E	84	91	anti-parallel
Strand 4	E	96	104	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z1G

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z1G