Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z1H entry

There are 4 chains in PDB entry 6Z1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8GLU 451
B
 SER 8HIS 454
C
 UNK 249UNK 266
D
 UNK 246UNK 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6Z1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 27Right-handed alpha
Helix 2
AA2
A
38 45Right-handed alpha
Helix 3
AA3
A
50 54Right-handed 310
Helix 4
AA4
A
61 77Right-handed alpha
Helix 5
AA5
A
86 91Right-handed alpha
Helix 6
AA6
A
99 116Right-handed alpha
Helix 7
AA7
A
130 136Right-handed alpha
Helix 8
AA8
A
137 141Right-handed 310
Helix 9
AA9
A
142 160Right-handed alpha
Helix 10
AB1
A
171 181Right-handed alpha
Helix 11
AB2
A
191 216Right-handed alpha
Helix 12
AB3
A
285 293Right-handed alpha
Helix 13
AB4
A
335 350Right-handed alpha
Helix 14
AB5
A
374 394Right-handed alpha
Helix 15
AB6
A
411 415Right-handed 310
Helix 16
AB7
A
435 448Right-handed alpha
Helix 17
AB8
B
22 27Right-handed alpha
Helix 18
AB9
B
38 45Right-handed alpha
Helix 19
AC1
B
50 54Right-handed 310
Helix 20
AC2
B
61 77Right-handed alpha
Helix 21
AC3
B
86 91Right-handed alpha
Helix 22
AC4
B
99 116Right-handed alpha
Helix 23
AC5
B
130 135Right-handed alpha
Helix 24
AC6
B
136 140Right-handed 310
Helix 25
AC7
B
141 160Right-handed alpha
Helix 26
AC8
B
171 181Right-handed alpha
Helix 27
AC9
B
191 217Right-handed alpha
Helix 28
AD1
B
284 293Right-handed alpha
Helix 29
AD2
B
335 350Right-handed alpha
Helix 30
AD3
B
374 394Right-handed alpha
Helix 31
AD4
B
411 418Right-handed 310
Helix 32
AD5
B
435 448Right-handed alpha
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There are 6 sheets in PDB entry 6Z1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
449 450anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
80 84parallel
Strand 3
A
119 125parallel
Strand 4
A
165 170parallel
Strand 5
A
221 226parallel
Strand 6
A
298 303parallel
Strand 7
A
354 359parallel
Strand 8
A
398 404parallel
Strand 9
A
16 20parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 426first strand
Strand 2
A
431 434anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 10first strand
Strand 2
B
449 450anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 20first strand
Strand 2
B
80 84parallel
Strand 3
B
119 125parallel
Strand 4
B
165 170parallel
Strand 5
B
221 226parallel
Strand 6
B
298 303parallel
Strand 7
B
354 359parallel
Strand 8
B
398 403parallel
Strand 9
B
16 20parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
423 426first strand
Strand 2
B
431 434anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il