Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z1R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z1R entry

There are 29 chains in PDB entry 6Z1R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 23	PHE 508
B	SER 9	PHE 508
C	LYS 2	GLU 509
D	THR 13	HIS 481
E	THR 13	GLU 479
F	THR 13	GLU 479
G	ALA 1	LEU 272
H	GLN 15	GLU 146
I	VAL 1	VAL 47
J	VAL 8	SER 54
K	ASP 1	LEU 42
K	GLN 44	ALA 74
L	ASP 1	LEU 42
L	GLN 44	MET 75
M	ASP 1	LEU 42
M	GLN 44	ALA 74
N	ASP 1	LEU 42
N	GLN 44	ALA 74
O	ASP 1	LEU 42
O	GLN 44	ALA 74
P	ASP 1	LEU 42
P	GLN 44	ALA 74
Q	ASP 1	LEU 42
Q	GLN 44	ALA 74
R	ASP 1	LEU 42
R	GLN 44	ALA 74
S	PHE 1	GLU 188
b	VAL 138	GLN 209
h	LYS 9	TYR 50

There are172 helices in PDB entry 6Z1R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	78	82	Right-handed 310
Helix 2	AA2	A	150	157	Right-handed alpha
Helix 3	AA3	A	174	186	Right-handed alpha
Helix 4	AA4	A	186	191	Right-handed alpha
Helix 5	AA5	A	209	223	Right-handed alpha
Helix 6	AA6	A	239	259	Right-handed alpha
Helix 7	AA7	A	271	286	Right-handed alpha
Helix 8	AA8	A	290	294	Right-handed 310
Helix 9	AA9	A	299	307	Right-handed alpha
Helix 10	AB1	A	313	317	Right-handed 310
Helix 11	AB2	A	330	333	Right-handed 310
Helix 12	AB3	A	336	344	Right-handed alpha
Helix 13	AB4	A	353	359	Right-handed alpha
Helix 14	AB5	A	374	379	Right-handed 310
Helix 15	AB6	A	380	399	Right-handed alpha
Helix 16	AB7	A	400	406	Right-handed 310
Helix 17	AB8	A	411	428	Right-handed alpha
Helix 18	AB9	A	437	451	Right-handed alpha
Helix 19	AC1	A	457	459	Right-handed 310
Helix 20	AC2	A	460	475	Right-handed alpha
Helix 21	AC3	A	476	487	Right-handed alpha
Helix 22	AC4	A	490	507	Right-handed alpha
Helix 23	AC5	B	10	17	Right-handed alpha
Helix 24	AC6	B	78	82	Right-handed 310
Helix 25	AC7	B	150	156	Right-handed alpha
Helix 26	AC8	B	174	186	Right-handed alpha
Helix 27	AC9	B	209	223	Right-handed alpha
Helix 28	AD1	B	239	244	Right-handed alpha
Helix 29	AD2	B	245	260	Right-handed alpha
Helix 30	AD3	B	274	284	Right-handed alpha
Helix 31	AD4	B	290	294	Right-handed 310
Helix 32	AD5	B	295	298	Right-handed 310
Helix 33	AD6	B	299	307	Right-handed alpha
Helix 34	AD7	B	313	317	Right-handed 310
Helix 35	AD8	B	330	333	Right-handed 310
Helix 36	AD9	B	336	344	Right-handed alpha
Helix 37	AE1	B	353	359	Right-handed alpha
Helix 38	AE2	B	380	401	Right-handed alpha
Helix 39	AE3	B	411	429	Right-handed alpha
Helix 40	AE4	B	437	450	Right-handed alpha
Helix 41	AE5	B	457	459	Right-handed 310
Helix 42	AE6	B	460	475	Right-handed alpha
Helix 43	AE7	B	476	486	Right-handed alpha
Helix 44	AE8	B	490	507	Right-handed alpha
Helix 45	AE9	C	8	17	Right-handed alpha
Helix 46	AF1	C	19	23	Right-handed 310
Helix 47	AF2	C	78	82	Right-handed 310
Helix 48	AF3	C	150	157	Right-handed alpha
Helix 49	AF4	C	174	186	Right-handed alpha
Helix 50	AF5	C	186	191	Right-handed alpha
Helix 51	AF6	C	209	223	Right-handed alpha
Helix 52	AF7	C	239	259	Right-handed alpha
Helix 53	AF8	C	270	285	Right-handed alpha
Helix 54	AF9	C	290	294	Right-handed 310
Helix 55	AG1	C	297	307	Right-handed alpha
Helix 56	AG2	C	313	317	Right-handed 310
Helix 57	AG3	C	336	344	Right-handed alpha
Helix 58	AG4	C	374	379	Right-handed 310
Helix 59	AG5	C	380	398	Right-handed alpha
Helix 60	AG6	C	412	428	Right-handed alpha
Helix 61	AG7	C	437	451	Right-handed alpha
Helix 62	AG8	C	457	476	Right-handed alpha
Helix 63	AG9	C	476	487	Right-handed alpha
Helix 64	AH1	C	490	507	Right-handed alpha
Helix 65	AH2	D	126	130	Right-handed 310
Helix 66	AH3	D	141	148	Right-handed alpha
Helix 67	AH4	D	165	180	Right-handed alpha
Helix 68	AH5	D	193	207	Right-handed alpha
Helix 69	AH6	D	229	234	Right-handed alpha
Helix 70	AH7	D	235	250	Right-handed alpha
Helix 71	AH8	D	263	274	Right-handed alpha
Helix 72	AH9	D	275	277	Right-handed 310
Helix 73	AI1	D	288	298	Right-handed alpha
Helix 74	AI2	D	317	320	Right-handed 310
Helix 75	AI3	D	323	330	Right-handed alpha
Helix 76	AI4	D	331	333	Right-handed 310
Helix 77	AI5	D	340	346	Right-handed alpha
Helix 78	AI6	D	368	396	Right-handed alpha
Helix 79	AI7	D	404	419	Right-handed alpha
Helix 80	AI8	D	425	430	Right-handed alpha
Helix 81	AI9	D	437	451	Right-handed alpha
Helix 82	AJ1	D	457	462	Right-handed 310
Helix 83	AJ2	D	466	481	Right-handed alpha
Helix 84	AJ3	E	141	147	Right-handed alpha
Helix 85	AJ4	E	165	181	Right-handed alpha
Helix 86	AJ5	E	193	208	Right-handed alpha
Helix 87	AJ6	E	229	234	Right-handed alpha
Helix 88	AJ7	E	235	250	Right-handed alpha
Helix 89	AJ8	E	262	277	Right-handed alpha
Helix 90	AJ9	E	288	298	Right-handed alpha
Helix 91	AK1	E	316	320	Right-handed 310
Helix 92	AK2	E	323	330	Right-handed alpha
Helix 93	AK3	E	340	345	Right-handed alpha
Helix 94	AK4	E	363	368	Right-handed alpha
Helix 95	AK5	E	368	395	Right-handed alpha
Helix 96	AK6	E	396	400	Right-handed 310
Helix 97	AK7	E	401	419	Right-handed alpha
Helix 98	AK8	E	425	430	Right-handed alpha
Helix 99	AK9	E	437	451	Right-handed alpha
Helix 100	AL1	E	457	461	Right-handed 310
Helix 101	AL2	E	466	477	Right-handed alpha
Helix 102	AL3	F	91	95	Right-handed 310
Helix 103	AL4	F	126	130	Right-handed 310
Helix 104	AL5	F	141	148	Right-handed alpha
Helix 105	AL6	F	165	180	Right-handed alpha
Helix 106	AL7	F	193	206	Right-handed alpha
Helix 107	AL8	F	229	250	Right-handed alpha
Helix 108	AL9	F	262	272	Right-handed alpha
Helix 109	AM1	F	288	298	Right-handed alpha
Helix 110	AM2	F	317	320	Right-handed 310
Helix 111	AM3	F	323	330	Right-handed alpha
Helix 112	AM4	F	331	333	Right-handed 310
Helix 113	AM5	F	340	345	Right-handed alpha
Helix 114	AM6	F	368	396	Right-handed alpha
Helix 115	AM7	F	397	400	Right-handed 310
Helix 116	AM8	F	401	419	Right-handed alpha
Helix 117	AM9	F	422	424	Right-handed 310
Helix 118	AN1	F	425	430	Right-handed alpha
Helix 119	AN2	F	437	451	Right-handed alpha
Helix 120	AN3	F	457	462	Right-handed 310
Helix 121	AN4	F	466	478	Right-handed alpha
Helix 122	AN5	G	2	55	Right-handed alpha
Helix 123	AN6	G	80	98	Right-handed alpha
Helix 124	AN7	G	109	116	Right-handed alpha
Helix 125	AN8	G	137	151	Right-handed alpha
Helix 126	AN9	G	180	187	Right-handed alpha
Helix 127	AO1	G	188	193	Right-handed 310
Helix 128	AO2	G	199	271	Right-handed alpha
Helix 129	AO3	H	101	103	Right-handed 310
Helix 130	AO4	H	104	120	Right-handed alpha
Helix 131	AO5	H	124	146	Right-handed alpha
Helix 132	AO6	I	10	25	Right-handed alpha
Helix 133	AO7	I	27	36	Right-handed alpha
Helix 134	AO8	J	13	19	Right-handed alpha
Helix 135	AO9	J	20	52	Right-handed alpha
Helix 136	AP1	K	2	16	Right-handed alpha
Helix 137	AP2	K	17	39	Right-handed alpha
Helix 138	AP3	K	42	74	Right-handed alpha
Helix 139	AP4	L	5	16	Right-handed alpha
Helix 140	AP5	L	17	39	Right-handed alpha
Helix 141	AP6	L	43	74	Right-handed alpha
Helix 142	AP7	M	2	15	Right-handed alpha
Helix 143	AP8	M	17	39	Right-handed alpha
Helix 144	AP9	M	43	74	Right-handed alpha
Helix 145	AQ1	N	2	17	Right-handed alpha
Helix 146	AQ2	N	17	39	Right-handed alpha
Helix 147	AQ3	N	42	74	Right-handed alpha
Helix 148	AQ4	O	2	15	Right-handed alpha
Helix 149	AQ5	O	17	39	Right-handed alpha
Helix 150	AQ6	O	42	73	Right-handed alpha
Helix 151	AQ7	P	2	13	Right-handed alpha
Helix 152	AQ8	P	17	39	Right-handed alpha
Helix 153	AQ9	P	42	74	Right-handed alpha
Helix 154	AR1	Q	2	15	Right-handed alpha
Helix 155	AR2	Q	17	39	Right-handed alpha
Helix 156	AR3	Q	45	74	Right-handed alpha
Helix 157	AR4	R	2	16	Right-handed alpha
Helix 158	AR5	R	17	39	Right-handed alpha
Helix 159	AR6	R	42	74	Right-handed alpha
Helix 160	AR7	S	13	28	Right-handed alpha
Helix 161	AR8	S	31	47	Right-handed alpha
Helix 162	AR9	S	48	57	Right-handed alpha
Helix 163	AS1	S	61	75	Right-handed alpha
Helix 164	AS2	S	79	93	Right-handed alpha
Helix 165	AS3	S	94	96	Right-handed 310
Helix 166	AS4	S	97	114	Right-handed alpha
Helix 167	AS5	S	127	140	Right-handed alpha
Helix 168	AS6	S	174	186	Right-handed alpha
Helix 169	AS7	b	139	185	Right-handed alpha
Helix 170	AS8	b	189	209	Right-handed alpha
Helix 171	AS9	h	10	23	Right-handed alpha
Helix 172	AT1	h	32	50	Right-handed alpha

There are 23 sheets in PDB entry 6Z1R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	87	90	anti-parallel
Strand 3	A	51	55	anti-parallel
Strand 4	A	60	66	anti-parallel
Strand 5	A	71	75	anti-parallel
Strand 6	A	38	43	anti-parallel
Strand 7	A	29	33	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	98	first strand
Strand 2	A	126	128	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	352	first strand
Strand 2	A	166	169	parallel
Strand 3	A	326	328	parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	234	first strand
Strand 2	A	200	206	parallel
Strand 3	A	263	269	parallel
Strand 4	A	320	323	parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	28	35	anti-parallel
Strand 3	B	38	43	anti-parallel
Strand 4	B	71	75	anti-parallel
Strand 5	B	60	66	anti-parallel
Strand 6	B	52	54	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	99	first strand
Strand 2	B	125	128	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	352	first strand
Strand 2	B	164	169	parallel
Strand 3	B	320	328	parallel
Strand 4	B	263	269	parallel
Strand 5	B	200	206	parallel
Strand 6	B	230	234	parallel

Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	35	first strand
Strand 2	C	38	43	anti-parallel
Strand 3	C	71	75	anti-parallel
Strand 4	C	60	66	anti-parallel
Strand 5	C	52	54	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	99	first strand
Strand 2	C	125	128	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	352	first strand
Strand 2	C	164	169	parallel
Strand 3	C	320	328	parallel
Strand 4	C	263	269	parallel
Strand 5	C	199	206	parallel
Strand 6	C	229	234	parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	21	first strand
Strand 2	D	24	28	anti-parallel
Strand 3	D	61	66	anti-parallel
Strand 4	D	50	56	anti-parallel
Strand 5	D	39	42	anti-parallel
Strand 6	D	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	90	first strand
Strand 2	D	116	119	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	160	first strand
Strand 2	D	307	315	parallel
Strand 3	D	254	259	parallel

Back to list of sheets
Back to top of page

There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	16	first strand
Strand 2	E	78	81	anti-parallel
Strand 3	E	39	42	anti-parallel
Strand 4	E	50	53	anti-parallel
Strand 5	E	61	66	anti-parallel
Strand 6	E	24	28	anti-parallel
Strand 7	E	16	21	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	89	first strand
Strand 2	E	117	119	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	335	338	first strand
Strand 2	E	155	159	parallel
Strand 3	E	307	313	parallel
Strand 4	E	254	259	parallel
Strand 5	E	185	192	parallel
Strand 6	E	219	225	parallel

Back to list of sheets
Back to top of page

There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	16	first strand
Strand 2	F	78	81	anti-parallel
Strand 3	F	39	43	anti-parallel
Strand 4	F	50	56	anti-parallel
Strand 5	F	61	66	anti-parallel
Strand 6	F	24	28	anti-parallel
Strand 7	F	16	21	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	90	first strand
Strand 2	F	116	119	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	335	338	first strand
Strand 2	F	156	160	parallel
Strand 3	F	307	315	parallel
Strand 4	F	254	259	parallel
Strand 5	F	184	190	parallel
Strand 6	F	219	224	parallel

Back to list of sheets
Back to top of page

There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	172	178	first strand
Strand 2	G	158	164	anti-parallel
Strand 3	G	68	71	parallel
Strand 4	G	105	108	parallel
Strand 5	G	124	128	parallel

Back to list of sheets
Back to top of page

There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	17	22	first strand
Strand 2	H	89	94	parallel
Strand 3	H	80	84	anti-parallel
Strand 4	H	54	57	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	47	first strand
Strand 2	H	33	38	anti-parallel
Strand 3	H	61	67	anti-parallel
Strand 4	H	73	77	anti-parallel
Strand 5	H	97	99	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	152	154	first strand
Strand 2	S	118	122	parallel
Strand 3	S	163	166	anti-parallel
Strand 4	S	169	172	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z1R

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z1R