Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z1S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z1S entry

There is 1 chain in PDB entry 6Z1S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 15GLU 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 6Z1S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 49Right-handed alpha
Helix 2
AA2
A
65 69Right-handed 310
Helix 3
AA3
A
70 85Right-handed alpha
Helix 4
AA4
A
101 118Right-handed alpha
Helix 5
AA5
A
122 141Right-handed alpha
Helix 6
AA6
A
152 157Right-handed 310
Helix 7
AA7
A
159 163Right-handed 310
Helix 8
AA8
A
233 238Right-handed 310
Helix 9
AA9
A
250 258Right-handed alpha
Helix 10
AB1
A
259 268Right-handed alpha
Helix 11
AB2
A
271 281Right-handed alpha
Helix 12
AB3
A
288 299Right-handed alpha
Helix 13
AB4
A
308 312Right-handed 310
Helix 14
AB5
A
313 333Right-handed alpha
Helix 15
AB6
A
346 350Right-handed 310
Helix 16
AB7
A
361 365Right-handed 310
Helix 17
AB8
A
389 392Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 6Z1S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
401 403parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
206 209anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
198 199anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
243 244anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 377first strand
Strand 2
A
386 387anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il