Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z2J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z2J entry

There are 6 chains in PDB entry 6Z2J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ARG 8ALA 376
E
 ARG 8ALA 376
A
 ASP 62SER 130
B
 ASP 62SER 130
F
 ARG 722LYS 879
D
 ARG 722LYS 879
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 6Z2J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
17 22Right-handed 310
Helix 2
AA2
C
33 45Right-handed alpha
Helix 3
AA3
C
46 51Right-handed 310
Helix 4
AA4
C
60 66Right-handed alpha
Helix 5
AA5
C
69 79Right-handed alpha
Helix 6
AA6
C
87 94Right-handed alpha
Helix 7
AA7
C
105 126Right-handed alpha
Helix 8
AA8
C
154 167Right-handed alpha
Helix 9
AA9
C
180 186Right-handed alpha
Helix 10
AB1
C
216 220Right-handed 310
Helix 11
AB2
C
233 253Right-handed alpha
Helix 12
AB3
C
262 266Right-handed 310
Helix 13
AB4
C
277 290Right-handed alpha
Helix 14
AB5
C
304 319Right-handed alpha
Helix 15
AB6
C
333 337Right-handed 310
Helix 16
AB7
C
355 371Right-handed alpha
Helix 17
AB8
E
17 22Right-handed 310
Helix 18
AB9
E
33 45Right-handed alpha
Helix 19
AC1
E
46 51Right-handed 310
Helix 20
AC2
E
60 66Right-handed alpha
Helix 21
AC3
E
69 79Right-handed alpha
Helix 22
AC4
E
87 94Right-handed alpha
Helix 23
AC5
E
105 126Right-handed alpha
Helix 24
AC6
E
154 167Right-handed alpha
Helix 25
AC7
E
180 186Right-handed alpha
Helix 26
AC8
E
216 220Right-handed 310
Helix 27
AC9
E
233 253Right-handed alpha
Helix 28
AD1
E
262 266Right-handed 310
Helix 29
AD2
E
277 290Right-handed alpha
Helix 30
AD3
E
304 319Right-handed alpha
Helix 31
AD4
E
333 337Right-handed 310
Helix 32
AD5
E
355 371Right-handed alpha
Helix 33
AD6
A
64 104Right-handed alpha
Helix 34
AD7
A
109 126Right-handed alpha
Helix 35
AD8
A
127 130Right-handed 310
Helix 36
AD9
B
63 105Right-handed alpha
Helix 37
AE1
B
109 126Right-handed alpha
Helix 38
AE2
B
127 130Right-handed 310
Helix 39
AE3
F
724 728Right-handed 310
Helix 40
AE4
F
765 777Right-handed alpha
Helix 41
AE5
F
788 799Right-handed alpha
Helix 42
AE6
F
802 810Right-handed alpha
Helix 43
AE7
F
822 827Right-handed alpha
Helix 44
AE8
F
834 849Right-handed alpha
Helix 45
AE9
F
853 859Right-handed alpha
Helix 46
AF1
F
863 874Right-handed alpha
Helix 47
AF2
F
875 879Right-handed 310
Helix 48
AF3
D
724 728Right-handed 310
Helix 49
AF4
D
765 777Right-handed alpha
Helix 50
AF5
D
788 799Right-handed alpha
Helix 51
AF6
D
802 810Right-handed alpha
Helix 52
AF7
D
822 827Right-handed alpha
Helix 53
AF8
D
834 849Right-handed alpha
Helix 54
AF9
D
853 859Right-handed alpha
Helix 55
AG1
D
863 874Right-handed alpha
Helix 56
AG2
D
875 879Right-handed 310
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There are 2 sheets in PDB entry 6Z2J. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
193 195first strand
Strand 2
C
170 174parallel
Strand 3
C
256 260parallel
Strand 4
C
297 298parallel
Strand 5
C
131 134parallel
Strand 6
C
11 14parallel
Strand 7
C
52 56parallel
Strand 8
D
749 753anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
193 195first strand
Strand 2
E
170 174parallel
Strand 3
E
256 260parallel
Strand 4
E
297 298parallel
Strand 5
E
131 134parallel
Strand 6
E
11 14parallel
Strand 7
E
52 56parallel
Strand 8
F
749 753anti-parallel
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