Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z34 entry

There is 1 chain in PDB entry 6Z34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3HIS 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 6Z34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 16Right-handed alpha
Helix 2
2
A
26 31Right-handed 310
Helix 3
3
A
34 39Right-handed 310
Helix 4
4
A
171 179Right-handed alpha
Helix 5
5
A
187 192Right-handed alpha
Helix 6
6
A
304 306Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 6Z34. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 15 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 90first strand
Strand 2
A
43 58anti-parallel
Strand 3
A
421 436anti-parallel
Strand 4
A
392 403anti-parallel
Strand 5
A
377 389anti-parallel
Strand 6
A
350 361anti-parallel
Strand 7
A
335 346anti-parallel
Strand 8
A
293 302anti-parallel
Strand 9
A
280 290anti-parallel
Strand 10
A
233 240anti-parallel
Strand 11
A
214 230anti-parallel
Strand 12
A
150 166anti-parallel
Strand 13
A
130 145anti-parallel
Strand 14
A
94 101anti-parallel
Strand 15
A
84 91anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 107first strand
Strand 2
A
131 137anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
197 204anti-parallel
Strand 3
A
248 258anti-parallel
Strand 4
A
264 272anti-parallel
Strand 5
A
312 317anti-parallel
Strand 6
A
323 327anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
249 251anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il