Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z3W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z3W entry

There are 9 chains in PDB entry 6Z3W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	UNK 42	ARG 993
B	THR 11	ARG 273
C	ASN 11	PHE 261
D	GLN 58	CYS 151
E	MET 1	GLY 65
F	MET 1	TYR 110
G	ILE 41	LEU 179
H	GLY 2	ASN 192
I	GLY 50	ALA 213

There are 48 helices in PDB entry 6Z3W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	219	227	Right-handed alpha
Helix 2	AA2	A	483	510	Right-handed alpha
Helix 3	AA3	A	656	665	Right-handed alpha
Helix 4	AA4	A	962	993	Right-handed alpha
Helix 5	AA5	B	12	25	Right-handed alpha
Helix 6	AA6	B	30	49	Right-handed alpha
Helix 7	AA7	B	50	55	Right-handed 310
Helix 8	AA8	B	56	66	Right-handed alpha
Helix 9	AA9	B	68	83	Right-handed alpha
Helix 10	AB1	B	86	100	Right-handed alpha
Helix 11	AB2	B	102	117	Right-handed alpha
Helix 12	AB3	B	120	132	Right-handed alpha
Helix 13	AB4	B	136	151	Right-handed alpha
Helix 14	AB5	B	155	168	Right-handed alpha
Helix 15	AB6	B	170	185	Right-handed alpha
Helix 16	AB7	B	188	203	Right-handed alpha
Helix 17	AB8	B	204	222	Right-handed alpha
Helix 18	AB9	B	225	239	Right-handed alpha
Helix 19	AC1	B	246	273	Right-handed alpha
Helix 20	AC2	C	12	18	Right-handed alpha
Helix 21	AC3	C	18	40	Right-handed alpha
Helix 22	AC4	C	47	65	Right-handed alpha
Helix 23	AC5	C	69	82	Right-handed alpha
Helix 24	AC6	C	84	91	Right-handed alpha
Helix 25	AC7	C	111	131	Right-handed alpha
Helix 26	AC8	C	169	188	Right-handed alpha
Helix 27	AC9	C	211	260	Right-handed alpha
Helix 28	AD1	D	59	86	Right-handed alpha
Helix 29	AD2	D	99	120	Right-handed alpha
Helix 30	AD3	D	128	148	Right-handed alpha
Helix 31	AD4	E	2	32	Right-handed alpha
Helix 32	AD5	E	42	63	Right-handed alpha
Helix 33	AD6	F	3	7	Right-handed 310
Helix 34	AD7	F	15	45	Right-handed alpha
Helix 35	AD8	F	49	69	Right-handed alpha
Helix 36	AD9	F	81	86	Right-handed alpha
Helix 37	AE1	F	89	104	Right-handed alpha
Helix 38	AE2	G	163	179	Right-handed alpha
Helix 39	AE3	H	8	21	Right-handed alpha
Helix 40	AE4	H	56	73	Right-handed alpha
Helix 41	AE5	H	94	108	Right-handed alpha
Helix 42	AE6	H	118	122	Right-handed 310
Helix 43	AE7	H	152	166	Right-handed alpha
Helix 44	AE8	H	167	171	Right-handed 310
Helix 45	AE9	H	174	181	Right-handed alpha
Helix 46	AF1	I	91	106	Right-handed alpha
Helix 47	AF2	I	134	141	Right-handed alpha
Helix 48	AF3	I	201	213	Right-handed alpha

There are 24 sheets in PDB entry 6Z3W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	65	first strand
Strand 2	A	72	73	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	106	107	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	146	first strand
Strand 2	A	150	154	anti-parallel
Strand 3	A	161	166	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	179	first strand
Strand 2	A	186	192	anti-parallel
Strand 3	A	196	202	anti-parallel
Strand 4	A	209	211	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	179	first strand
Strand 2	A	186	192	anti-parallel
Strand 3	A	196	202	anti-parallel
Strand 4	A	214	216	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	235	236	anti-parallel
Strand 3	A	245	248	anti-parallel
Strand 4	A	256	259	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	325	first strand
Strand 2	A	332	334	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	376	first strand
Strand 2	A	390	394	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	411	first strand
Strand 2	A	417	419	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	537	540	anti-parallel
Strand 3	A	545	547	anti-parallel
Strand 4	A	557	559	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	571	575	first strand
Strand 2	A	586	593	anti-parallel
Strand 3	A	597	604	anti-parallel
Strand 4	A	614	615	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	625	629	first strand
Strand 2	A	639	643	anti-parallel
Strand 3	A	650	652	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	669	675	first strand
Strand 2	A	680	686	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	741	746	first strand
Strand 2	A	757	762	anti-parallel
Strand 3	A	771	775	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	793	795	first strand
Strand 2	A	804	806	anti-parallel
Strand 3	A	838	839	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	863	first strand
Strand 2	A	871	872	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	67	68	first strand
Strand 2	G	92	98	anti-parallel
Strand 3	G	106	112	anti-parallel
Strand 4	G	118	121	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	30	first strand
Strand 2	H	46	50	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	114	115	first strand
Strand 2	H	131	132	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	136	first strand
Strand 2	H	139	140	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	51	57	first strand
Strand 2	I	70	77	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	107	113	first strand
Strand 2	I	127	133	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	144	first strand
Strand 2	I	182	183	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	147	150	first strand
Strand 2	I	156	160	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z3W

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z3W