Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z47

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6Z47 entry

There are 8 chains in PDB entry 6Z47 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 30	SER 944
B	SER 30	SER 944
C	CYS 2	GLY 151
D	CYS 2	GLY 151
E	SER 20	LYS 168
F	SER 20	LYS 168
G	GLN 1404	MET 1660
H	GLN 1404	MET 1660

There are105 helices in PDB entry 6Z47. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	80	84	Right-handed 310
Helix 2	AA2	A	88	92	Right-handed 310
Helix 3	AA3	A	96	111	Right-handed alpha
Helix 4	AA4	A	134	142	Right-handed alpha
Helix 5	AA5	A	145	149	Right-handed 310
Helix 6	AA6	A	152	168	Right-handed alpha
Helix 7	AA7	A	182	198	Right-handed alpha
Helix 8	AA8	A	218	235	Right-handed alpha
Helix 9	AA9	A	273	279	Right-handed 310
Helix 10	AB1	A	287	297	Right-handed alpha
Helix 11	AB2	A	298	306	Right-handed alpha
Helix 12	AB3	A	327	342	Right-handed alpha
Helix 13	AB4	A	346	363	Right-handed alpha
Helix 14	AB5	A	380	392	Right-handed alpha
Helix 15	AB6	A	394	404	Right-handed alpha
Helix 16	AB7	A	419	451	Right-handed alpha
Helix 17	AB8	A	476	509	Right-handed alpha
Helix 18	AB9	A	521	529	Right-handed alpha
Helix 19	AC1	A	536	547	Right-handed alpha
Helix 20	AC2	A	551	564	Right-handed alpha
Helix 21	AC3	A	575	578	Right-handed 310
Helix 22	AC4	A	596	603	Right-handed alpha
Helix 23	AC5	A	606	615	Right-handed alpha
Helix 24	AC6	A	618	625	Right-handed alpha
Helix 25	AC7	A	658	677	Right-handed alpha
Helix 26	AC8	A	697	708	Right-handed alpha
Helix 27	AC9	A	709	720	Right-handed alpha
Helix 28	AD1	A	727	735	Right-handed alpha
Helix 29	AD2	A	736	738	Right-handed 310
Helix 30	AD3	A	748	760	Right-handed alpha
Helix 31	AD4	A	779	836	Right-handed alpha
Helix 32	AD5	A	839	852	Right-handed alpha
Helix 33	AD6	A	855	944	Right-handed alpha
Helix 34	AD7	B	80	84	Right-handed 310
Helix 35	AD8	B	88	92	Right-handed 310
Helix 36	AD9	B	96	110	Right-handed alpha
Helix 37	AE1	B	134	142	Right-handed alpha
Helix 38	AE2	B	145	149	Right-handed 310
Helix 39	AE3	B	152	168	Right-handed alpha
Helix 40	AE4	B	182	198	Right-handed alpha
Helix 41	AE5	B	218	235	Right-handed alpha
Helix 42	AE6	B	274	278	Right-handed 310
Helix 43	AE7	B	287	295	Right-handed alpha
Helix 44	AE8	B	298	306	Right-handed alpha
Helix 45	AE9	B	327	342	Right-handed alpha
Helix 46	AF1	B	349	363	Right-handed alpha
Helix 47	AF2	B	381	390	Right-handed alpha
Helix 48	AF3	B	394	403	Right-handed alpha
Helix 49	AF4	B	419	449	Right-handed alpha
Helix 50	AF5	B	476	509	Right-handed alpha
Helix 51	AF6	B	521	530	Right-handed alpha
Helix 52	AF7	B	536	545	Right-handed alpha
Helix 53	AF8	B	551	564	Right-handed alpha
Helix 54	AF9	B	575	578	Right-handed 310
Helix 55	AG1	B	596	600	Right-handed 310
Helix 56	AG2	B	606	615	Right-handed alpha
Helix 57	AG3	B	618	625	Right-handed alpha
Helix 58	AG4	B	658	677	Right-handed alpha
Helix 59	AG5	B	697	708	Right-handed alpha
Helix 60	AG6	B	709	720	Right-handed alpha
Helix 61	AG7	B	727	735	Right-handed alpha
Helix 62	AG8	B	736	738	Right-handed 310
Helix 63	AG9	B	748	760	Right-handed alpha
Helix 64	AH1	B	777	836	Right-handed alpha
Helix 65	AH2	B	840	848	Right-handed alpha
Helix 66	AH3	B	851	944	Right-handed alpha
Helix 67	AH4	C	5	19	Right-handed alpha
Helix 68	AH5	C	28	39	Right-handed alpha
Helix 69	AH6	C	45	50	Right-handed alpha
Helix 70	AH7	C	66	79	Right-handed alpha
Helix 71	AH8	C	85	97	Right-handed alpha
Helix 72	AH9	C	106	116	Right-handed alpha
Helix 73	AI1	C	121	127	Right-handed alpha
Helix 74	AI2	C	140	149	Right-handed alpha
Helix 75	AI3	D	5	19	Right-handed alpha
Helix 76	AI4	D	29	40	Right-handed alpha
Helix 77	AI5	D	46	51	Right-handed alpha
Helix 78	AI6	D	66	81	Right-handed alpha
Helix 79	AI7	D	85	97	Right-handed alpha
Helix 80	AI8	D	106	115	Right-handed alpha
Helix 81	AI9	D	123	129	Right-handed alpha
Helix 82	AJ1	D	141	150	Right-handed alpha
Helix 83	AJ2	E	21	26	Right-handed 310
Helix 84	AJ3	E	27	42	Right-handed alpha
Helix 85	AJ4	E	50	62	Right-handed alpha
Helix 86	AJ5	E	67	75	Right-handed alpha
Helix 87	AJ6	E	82	95	Right-handed alpha
Helix 88	AJ7	E	99	109	Right-handed alpha
Helix 89	AJ8	E	120	129	Right-handed alpha
Helix 90	AJ9	E	135	145	Right-handed alpha
Helix 91	AK1	E	149	151	Right-handed 310
Helix 92	AK2	E	155	165	Right-handed alpha
Helix 93	AK3	F	27	42	Right-handed alpha
Helix 94	AK4	F	50	62	Right-handed alpha
Helix 95	AK5	F	67	75	Right-handed alpha
Helix 96	AK6	F	83	95	Right-handed alpha
Helix 97	AK7	F	99	109	Right-handed alpha
Helix 98	AK8	F	119	130	Right-handed alpha
Helix 99	AK9	F	135	145	Right-handed alpha
Helix 100	AL1	F	149	153	Right-handed 310
Helix 101	AL2	F	155	165	Right-handed alpha
Helix 102	AL3	G	1405	1527	Right-handed alpha
Helix 103	AL4	G	1533	1660	Right-handed alpha
Helix 104	AL5	H	1405	1528	Right-handed alpha
Helix 105	AL6	H	1531	1660	Right-handed alpha

There are 18 sheets in PDB entry 6Z47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	71	first strand
Strand 2	A	56	61	anti-parallel
Strand 3	A	43	53	anti-parallel
Strand 4	A	34	39	anti-parallel
Strand 5	A	76	77	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	117	first strand
Strand 2	A	120	124	anti-parallel
Strand 3	A	678	685	parallel
Strand 4	A	171	176	parallel
Strand 5	A	459	465	parallel
Strand 6	A	250	256	anti-parallel
Strand 7	A	262	269	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	237	first strand
Strand 2	A	245	246	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	369	first strand
Strand 2	A	376	377	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	409	first strand
Strand 2	A	412	415	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	570	first strand
Strand 2	A	580	583	anti-parallel
Strand 3	A	590	593	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	723	726	first strand
Strand 2	A	773	776	anti-parallel
Strand 3	A	767	769	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	71	first strand
Strand 2	B	56	60	anti-parallel
Strand 3	B	43	53	anti-parallel
Strand 4	B	34	39	anti-parallel
Strand 5	B	76	77	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	117	first strand
Strand 2	B	120	124	anti-parallel
Strand 3	B	678	685	parallel
Strand 4	B	171	176	parallel
Strand 5	B	459	465	parallel
Strand 6	B	248	256	anti-parallel
Strand 7	B	262	272	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	237	first strand
Strand 2	B	245	246	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	409	first strand
Strand 2	B	412	415	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	570	first strand
Strand 2	B	580	585	anti-parallel
Strand 3	B	588	593	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	725	726	first strand
Strand 2	B	773	776	anti-parallel
Strand 3	B	767	769	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	105	first strand
Strand 2	C	138	139	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	28	first strand
Strand 2	D	64	65	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	105	first strand
Strand 2	D	138	140	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	E	153	154	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	49	first strand
Strand 2	F	81	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6Z47

Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z47