Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z4X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z4X entry

There are 5 chains in PDB entry 6Z4X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5GLY 390
B
 PRO 78SER 399
C
 ASP 273GLY 338
D
 THR 4GLY 390
E
 THR 77ASN 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 76 helices in PDB entry 6Z4X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 14Right-handed alpha
Helix 2
AA2
A
15 21Right-handed alpha
Helix 3
AA3
A
24 49Right-handed alpha
Helix 4
AA4
A
82 104Right-handed alpha
Helix 5
AA5
A
107 125Right-handed alpha
Helix 6
AA6
A
131 147Right-handed alpha
Helix 7
AA7
A
152 160Right-handed alpha
Helix 8
AA8
A
165 179Right-handed alpha
Helix 9
AA9
A
188 201Right-handed alpha
Helix 10
AB1
A
206 222Right-handed alpha
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
229 234Right-handed alpha
Helix 13
AB4
A
235 262Right-handed alpha
Helix 14
AB5
A
313 331Right-handed alpha
Helix 15
AB6
A
332 335Right-handed 310
Helix 16
AB7
A
336 341Right-handed alpha
Helix 17
AB8
A
342 350Right-handed alpha
Helix 18
AB9
A
350 361Right-handed alpha
Helix 19
AC1
A
367 381Right-handed alpha
Helix 20
AC2
B
79 91Right-handed alpha
Helix 21
AC3
B
135 149Right-handed alpha
Helix 22
AC4
B
179 186Right-handed alpha
Helix 23
AC5
B
193 214Right-handed alpha
Helix 24
AC6
B
222 224Right-handed 310
Helix 25
AC7
B
258 262Right-handed 310
Helix 26
AC8
B
263 268Right-handed alpha
Helix 27
AC9
B
275 292Right-handed alpha
Helix 28
AD1
B
300 312Right-handed alpha
Helix 29
AD2
B
322 326Right-handed 310
Helix 30
AD3
B
341 350Right-handed alpha
Helix 31
AD4
B
352 364Right-handed alpha
Helix 32
AD5
B
367 371Right-handed 310
Helix 33
AD6
B
373 379Right-handed alpha
Helix 34
AD7
B
391 395Right-handed 310
Helix 35
AD8
C
293 301Right-handed alpha
Helix 36
AD9
C
302 308Right-handed alpha
Helix 37
AE1
C
311 325Right-handed alpha
Helix 38
AE2
C
330 337Right-handed alpha
Helix 39
AE3
D
6 14Right-handed alpha
Helix 40
AE4
D
15 21Right-handed alpha
Helix 41
AE5
D
24 49Right-handed alpha
Helix 42
AE6
D
82 104Right-handed alpha
Helix 43
AE7
D
107 125Right-handed alpha
Helix 44
AE8
D
131 147Right-handed alpha
Helix 45
AE9
D
152 160Right-handed alpha
Helix 46
AF1
D
165 179Right-handed alpha
Helix 47
AF2
D
188 201Right-handed alpha
Helix 48
AF3
D
206 222Right-handed alpha
Helix 49
AF4
D
223 228Right-handed alpha
Helix 50
AF5
D
229 234Right-handed alpha
Helix 51
AF6
D
235 262Right-handed alpha
Helix 52
AF7
D
312 331Right-handed alpha
Helix 53
AF8
D
332 334Right-handed 310
Helix 54
AF9
D
335 341Right-handed alpha
Helix 55
AG1
D
342 350Right-handed alpha
Helix 56
AG2
D
350 361Right-handed alpha
Helix 57
AG3
D
367 381Right-handed alpha
Helix 58
AG4
E
79 91Right-handed alpha
Helix 59
AG5
E
135 149Right-handed alpha
Helix 60
AG6
E
179 186Right-handed alpha
Helix 61
AG7
E
193 214Right-handed alpha
Helix 62
AG8
E
222 224Right-handed 310
Helix 63
AG9
E
258 262Right-handed 310
Helix 64
AH1
E
263 268Right-handed alpha
Helix 65
AH2
E
275 292Right-handed alpha
Helix 66
AH3
E
300 312Right-handed alpha
Helix 67
AH4
E
322 326Right-handed 310
Helix 68
AH5
E
341 350Right-handed alpha
Helix 69
AH6
E
352 364Right-handed alpha
Helix 70
AH7
E
367 371Right-handed 310
Helix 71
AH8
E
373 379Right-handed alpha
Helix 72
AH9
E
391 395Right-handed 310
Helix 73
AI1
F
293 301Right-handed alpha
Helix 74
AI2
F
302 308Right-handed alpha
Helix 75
AI3
F
311 325Right-handed alpha
Helix 76
AI4
F
330 337Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 6Z4X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 100first strand
Strand 2
B
104 111anti-parallel
Strand 3
B
118 124anti-parallel
Strand 4
B
168 172anti-parallel
Strand 5
B
157 162anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 217first strand
Strand 2
B
243 244anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 228first strand
Strand 2
B
234 236anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
92 100first strand
Strand 2
E
104 111anti-parallel
Strand 3
E
118 124anti-parallel
Strand 4
E
168 172anti-parallel
Strand 5
E
157 162anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
216 217first strand
Strand 2
E
243 244anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
226 228first strand
Strand 2
E
234 236anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il