Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z5T entry

There are 2 chains in PDB entry 6Z5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 206LYS 379
B
 GLU 206LYS 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6Z5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
226 235Right-handed alpha
Helix 2
AA2
A
252 261Right-handed alpha
Helix 3
AA3
A
263 277Right-handed alpha
Helix 4
AA4
A
303 307Right-handed 310
Helix 5
AA5
A
311 319Right-handed alpha
Helix 6
AA6
A
320 323Right-handed 310
Helix 7
AA7
A
339 351Right-handed alpha
Helix 8
AA8
A
361 378Right-handed alpha
Helix 9
AA9
B
226 235Right-handed alpha
Helix 10
AB1
B
252 261Right-handed alpha
Helix 11
AB2
B
263 277Right-handed alpha
Helix 12
AB3
B
303 307Right-handed 310
Helix 13
AB4
B
311 319Right-handed alpha
Helix 14
AB5
B
320 323Right-handed 310
Helix 15
AB6
B
339 351Right-handed alpha
Helix 16
AB7
B
361 379Right-handed alpha
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There are 4 sheets in PDB entry 6Z5T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
220 223anti-parallel
Strand 3
A
354 358parallel
Strand 4
A
325 328parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 243first strand
Strand 2
A
295 300parallel
Strand 3
A
284 288anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 215first strand
Strand 2
B
220 223anti-parallel
Strand 3
B
354 358parallel
Strand 4
B
325 328parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 242first strand
Strand 2
B
295 299parallel
Strand 3
B
284 288anti-parallel
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