Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z67 entry

There are 3 chains in PDB entry 6Z67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 1ASP 229
B
 GLY 1ASP 229
E
 GLY 1TYR 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6Z67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
42 49Right-handed alpha
Helix 2
AA2
C
72 74Right-handed 310
Helix 3
AA3
C
75 82Right-handed alpha
Helix 4
AA4
C
97 109Right-handed alpha
Helix 5
AA5
C
112 127Right-handed alpha
Helix 6
AA6
C
129 133Right-handed 310
Helix 7
AA7
C
136 140Right-handed 310
Helix 8
AA8
C
141 155Right-handed alpha
Helix 9
AA9
C
171 188Right-handed alpha
Helix 10
AB1
C
198 205Right-handed alpha
Helix 11
AB2
B
42 50Right-handed alpha
Helix 12
AB3
B
72 74Right-handed 310
Helix 13
AB4
B
75 82Right-handed alpha
Helix 14
AB5
B
97 110Right-handed alpha
Helix 15
AB6
B
112 128Right-handed alpha
Helix 16
AB7
B
129 133Right-handed 310
Helix 17
AB8
B
136 140Right-handed 310
Helix 18
AB9
B
141 155Right-handed alpha
Helix 19
AC1
B
171 188Right-handed alpha
Helix 20
AC2
B
198 205Right-handed alpha
Helix 21
AC3
E
42 51Right-handed alpha
Helix 22
AC4
E
72 74Right-handed 310
Helix 23
AC5
E
75 82Right-handed alpha
Helix 24
AC6
E
97 105Right-handed alpha
Helix 25
AC7
E
113 127Right-handed alpha
Helix 26
AC8
E
129 133Right-handed 310
Helix 27
AC9
E
136 140Right-handed 310
Helix 28
AD1
E
141 155Right-handed alpha
Helix 29
AD2
E
171 188Right-handed alpha
Helix 30
AD3
E
198 205Right-handed alpha
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There are 6 sheets in PDB entry 6Z67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 27first strand
Strand 2
C
4 12anti-parallel
Strand 3
C
58 63anti-parallel
Strand 4
C
66 67anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 86first strand
Strand 2
C
160 164parallel
Strand 3
C
191 195parallel
Strand 4
C
32 36parallel
Strand 5
C
208 213parallel
Strand 6
C
216 221anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 27first strand
Strand 2
B
4 12anti-parallel
Strand 3
B
58 63anti-parallel
Strand 4
B
66 67anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
160 164parallel
Strand 3
B
191 195parallel
Strand 4
B
32 36parallel
Strand 5
B
208 213parallel
Strand 6
B
216 221anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 27first strand
Strand 2
E
4 12anti-parallel
Strand 3
E
58 63anti-parallel
Strand 4
E
66 67anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 86first strand
Strand 2
E
160 164parallel
Strand 3
E
191 195parallel
Strand 4
E
32 36parallel
Strand 5
E
208 213parallel
Strand 6
E
216 221anti-parallel
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