Analysis of interatomic Contacts of Structural Units in PDB entry:
6Z6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6Z6D entry

There is 1 chain in PDB entry 6Z6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6Z6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
30 42Right-handed alpha
Helix 3
AA3
A
59 73Right-handed alpha
Helix 4
AA4
A
89 107Right-handed alpha
Helix 5
AA5
A
107 112Right-handed alpha
Helix 6
AA6
A
155 158Right-handed 310
Helix 7
AA7
A
163 174Right-handed alpha
Helix 8
AA8
A
193 206Right-handed alpha
Helix 9
AA9
A
225 233Right-handed alpha
Helix 10
AB1
A
241 255Right-handed alpha
Helix 11
AB2
A
258 268Right-handed alpha
Helix 12
AB3
A
279 285Right-handed alpha
Helix 13
AB4
A
335 344Right-handed alpha
Helix 14
AB5
A
346 353Right-handed alpha
Helix 15
AB6
A
365 377Right-handed alpha
Helix 16
AB7
A
378 380Right-handed 310
Helix 17
AB8
A
391 402Right-handed alpha
Helix 18
AB9
A
414 431Right-handed alpha
Helix 19
AC1
A
439 449Right-handed alpha
Helix 20
AC2
A
470 482Right-handed alpha
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There are 4 sheets in PDB entry 6Z6D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
122 125anti-parallel
Strand 3
A
130 136anti-parallel
Strand 4
A
82 87parallel
Strand 5
A
149 153parallel
Strand 6
A
180 184parallel
Strand 7
A
49 53parallel
Strand 8
A
210 214parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 276first strand
Strand 2
A
450 453anti-parallel
Strand 3
A
459 461anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
323 332parallel
Strand 3
A
310 317anti-parallel
Strand 4
A
297 302anti-parallel
Strand 5
A
382 388parallel
Strand 6
A
408 411parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
323 332parallel
Strand 3
A
434 435parallel
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